Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02216 ATGGCAGCGGCGATGATGATCTCCTTTTATCTTTTTCTCTTTTCTTTCCACAATTTGTTTTCTTTAGCAGCTAGTTCAAAGATCAGGATCACGCAGGGTGTCACGATCAGGGACAAAGAGCATGAAACTTTGGTCTCAGAAGAGCTCAACTTCGCGATGGGTTTCTTCAGCTTCGACAACTCCTCCTCCCGCTACGTCGGAATTTGGTACGACAACATTCCCGGATCAGAAGTTATATGGGTGGCAAACCGCGACAAACCCATCAACGGCACCGTAGGAGCCATCACAATCGCAAATGACGGCAACCTCGTAGTCCTCGATGGAGCCATGAACCATGTCTGGTCCACCAATGTTTCCATTGATGATAACAACAAAAACTCCTCAGCAACTCTTCGTGACGATGGCAATCTCGTACTCACATGCGAAAGGAAAGAGGTTTGGCAAAGCTTCGAGAATCCAACGGATACATACATGCCAGGTATGAAGGTGTCAGTGGGTGGATTGAGCACTAGCCATGTCTTCACTTCATGGAAATCAGCCACGGATCCTTCAAAGGGAAACTACACTATGGGGGTGGATCCTGAAGGGTTACCTCAGATAGTGGTTTGGGAAGGGGAAAAAAGAAGGTGGAGAAGTGGGTATTGGGATGGTAGAATGTTTCAAGGGTTGTCCATCGCAGCAAGTTATCTTTACGGTTTCACGCTTAATGGGGATGGTAAAGGTGGTAGGTACTTCATATATAACCCCTTAAACGGCACTGATAAGGTGAGGTTTCAAATAGGGTGGGATGGGTATGAGAGAGAGTTCCGATGGAATGAAGATGAGAAAAGTTGGAACGAGATTCAAAAAGGGCCTTTTCACGAGTGTGATGTTTATAACAAGTGTGGGAGTTTCGCGGCGTGTGATGTGTTAACGTTGTCCCCCGAGGATTTAGTACCTGTTTGTACTTGCATACGAGGTTTTGAACCGAAGCATAAGGATCAGTGGGATAAGGGGAACTGGTCGGGTGGGTGTACGAGGATGACTCCACTCAAGGCTCAGAGGATTAATGTTACTTCCGGGACTGGCGTTAGTGTTGGAGAGGATGGGTTCTTGGATCGTAAGTCTATGAAGTTGCCGGATTTCGCACTTGTGGTTGGCACGAATGATTGTGACAGAGAGTGTTTTAGCAATGATTCTTGTACTGCGTATGCTAATGTTAATGGATTAGGGTGCATGGTGTGGCATGGGGACTTGGTTGATATTCAACATTTGGAAAGTGGAGGAAATACATTGTACATACGCCTCGCTCATTCTGATTTAGATGATGGTGGAAAAACGAACAGAATTGTGATAATATCAACTGTTGTGGCGGGGTTAATCTGCCTAGGAATCTTTGTATGGCTGGTGTGGAGATTCAAGGCAAAACTGAAAGTTCTGCCTACAGTTTCCTCAGTTTCTTGTTGCAAGAGTAGTAATGTACTACCAGTTTTTGATGAAAACAAGAGCAGAGAGATGTCAGCAGAATTTTCAGGATCAGCTGACCTTACTTTGGAGGGGAACCAATTAAGTGGACCAGAATTTCCAGTTTTCAATTTTAGTTGCATTTCTATAGCCACAAACAATTTCTCTGAAGAAAATAAGCTTGGGCAAGGGGGTTTTGGCCCTGTCTACAAGggaaagcttccaggcggagaacaaatagctgttaagaggctttcaagacggtctggccaaggcttagaggagttcaagaatgaaatgatgctgatagccaaactacaacacagaaatttagttagattaatgggttgctctattcaaggggaagagaagttgctggtatatgaatacatgccaaacaaaagcttggattgctttttatttgATCCAGTCAAACAAACACAACTACCTTGGACAAGACGTTTTGAAATCATTGAAAGCAttgcgagagcattactttatttgcaccgtgattcaagacttagaataattcatcgagatttaaaagcgagtaacattttgttggatgaaaacatgaacccgaaaatatcagactttggcttggccaggatatttggtgggaaccagaatgaagccaatacGAACAGAGTAGTTGGTACATAtggttatatggcccctgaatatgcaatggaaggtctgttttcagtcaagtctgatgtatacagttttggtgtattactactagagattttgagtggccgcagaaacactagctttcgtcaCTCAGATGACTCAAGCCTCATAGGATATGCATGGCATCTTTGGAATGAACACAGAGCAATGGAGCTTCTTGATCCTTGCATTCGTGATTCTAGTCCTAGAAACAAGGCTTTGAGATGCATACACATAGGGATGTTATGTGTGCAAGATTCAGCAGCTCACAGGCCAAACATGTCTGCTGTGGTGTTGATGCTGGAAAGTGAAGCAACAACTCTTCCCATGCCTACGCAACCTTTGATTACTTCAATGAGGAGAACTGAGGACAGACAATTTTACATGGATGGCCTTGATGTTTCAAATGATTTGACAGTCACAATGGTGGTAGGGAGATAG 2556 0.3599 MAAAMMISFYLFLFSFHNLFSLAASSKIRITQGVTIRDKEHETLVSEELNFAMGFFSFDNSSSRYVGIWYDNIPGSEVIWVANRDKPINGTVGAITIANDGNLVVLDGAMNHVWSTNVSIDDNNKNSSATLRDDGNLVLTCERKEVWQSFENPTDTYMPGMKVSVGGLSTSHVFTSWKSATDPSKGNYTMGVDPEGLPQIVVWEGEKRRWRSGYWDGRMFQGLSIAASYLYGFTLNGDGKGGRYFIYNPLNGTDKVRFQIGWDGYEREFRWNEDEKSWNEIQKGPFHECDVYNKCGSFAACDVLTLSPEDLVPVCTCIRGFEPKHKDQWDKGNWSGGCTRMTPLKAQRINVTSGTGVSVGEDGFLDRKSMKLPDFALVVGTNDCDRECFSNDSCTAYANVNGLGCMVWHGDLVDIQHLESGGNTLYIRLAHSDLDDGGKTNRIVIISTVVAGLICLGIFVWLVWRFKAKLKVLPTVSSVSCCKSSNVLPVFDENKSREMSAEFSGSADLTLEGNQLSGPEFPVFNFSCISIATNNFSEENKLGQGGFGPVYKGKLPGGEQIAVKRLSRRSGQGLEEFKNEMMLIAKLQHRNLVRLMGCSIQGEEKLLVYEYMPNKSLDCFLFDPVKQTQLPWTRRFEIIESIARALLYLHRDSRLRIIHRDLKASNILLDENMNPKISDFGLARIFGGNQNEANTNRVVGTYGYMAPEYAMEGLFSVKSDVYSFGVLLLEILSGRRNTSFRHSDDSSLIGYAWHLWNEHRAMELLDPCIRDSSPRNKALRCIHIGMLCVQDSAAHRPNMSAVVLMLESEATTLPMPTQPLITSMRRTEDRQFYMDGLDVSNDLTVTMVVGR 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02216 851 Gene3D Phosphorylase Kinase; domain 1 512 611 - -
Gma13g02216 851 ProSiteProfiles Bulb-type lectin domain profile. 27 152 IPR001480 -
Gma13g02216 851 SMART blect_4 35 153 IPR001480 -
Gma13g02216 851 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 217 IPR036426 -
Gma13g02216 851 ProSiteProfiles PAN/Apple domain profile. 359 430 IPR003609 -
Gma13g02216 851 Pfam PAN-like domain 360 415 IPR003609 -
Gma13g02216 851 Gene3D Transferase(Phosphotransferase) domain 1 612 815 - -
Gma13g02216 851 Gene3D - 22 150 IPR036426 -
Gma13g02216 851 ProSiteProfiles Protein kinase domain profile. 536 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g02216 851 CDD STKc_IRAK 542 807 - -
Gma13g02216 851 SMART ntp_6 359 429 IPR003609 -
Gma13g02216 851 CDD B_lectin 42 153 IPR001480 -
Gma13g02216 851 ProSitePatterns Serine/Threonine protein kinases active-site signature. 657 669 IPR008271 GO:0004672|GO:0006468
Gma13g02216 851 CDD PAN_AP_plant 361 430 - -
Gma13g02216 851 Pfam Protein tyrosine and serine/threonine kinase 539 804 IPR001245 GO:0004672|GO:0006468
Gma13g02216 851 PIRSF SRK 1 851 IPR024171 GO:0004674
Gma13g02216 851 Pfam S-locus glycoprotein domain 210 324 IPR000858 GO:0048544
Gma13g02216 851 Pfam D-mannose binding lectin 78 178 IPR001480 -
Gma13g02216 851 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 5 851 - -
Gma13g02216 851 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 5 851 - -
Gma13g02216 851 SMART serkin_6 536 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g02216 851 SUPERFAMILY Protein kinase-like (PK-like) 521 835 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02216 Gma-Chr13 37094802 37098456 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02216 437 819 Receptor kinase-like Gene Family AT4G23230 52.604 7.32e-131 403
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma13g02216 PK_Tyr_Ser-Thr 5.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02216 - - gmx:102660295 1723.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01830 07 39494503 39498948 Gma13g02216 13 37094802 37098456 PCT
Gma08g00576 08 4756015 4761037 Gma13g02216 13 37094802 37098456 PCT