Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02215 ATGGGATTCAGTACTGGTGGAAACACGTTACCTGTTTTTCTCATTCTGTCAAACTTTTACATGAATTGGGTCACTGCCTTAGACATCATTACAGTGTCTCGATTAATGAAAGACCCTGAAACTGTGACCTCTAACGATGGTGCATTCAAGCTAGGATTCTTCAGCCCCGGAAACACATCAAATCGCTATGTAGGAATCTGGTATCTCTCCGAATCCAATGTCATATGGGTGGCCAACAGAGGCCAACCACTAGAGGATTCTTCAGGTGTTGTCACCATATCCGACGACAGAAACCTTGTAGTGCTGAATGGAAGAAAACAAGTGGTTTGGTCATCAAATGTCTCAAACATTGAATCCAATTCAACTGCCCAACTTCTAAACACCGGAAACCTTGTCTTGCTGGATAACATCACAGGCAAGACAATATGGGAGAGTTTCAAACACCCCTCTAACACTTTCACACCAAATATGATAATTAGCACTAACCAAGTGACAGGAGAGAAAGTTAAAGTTACTTCGTGGAAAAGCCTTTCTGATCCAGCCATTGGAACCTTCTCTGGAAGCCTTGAGCGTCTCAGTGTTCCTGAAGTGTTTGTTTGGAATCAAACACAACCATGCTCAGGTCCATGGAACGGTCAGGTTTTTATTGGTTTGGCTACGATGTATACTTCTGCATATCTGAATGGATTCAGCGTAGAAAGGGAAAATAGCGTAACTGTTCAGATAACCTATACTTTGCCAAATGATTCTTTCTTTGGCACCATTTTCTTGAGTCCAGAAGGCAGGATGGTTTACACATCCTGGATCAACAGACAACTAGTTGGGAAGCGGGTAATTCAACAAAGTAACTGCGATATTTATGGCTTCTGCGGCGCTTATGGAAGCTGTGATTCGAATAAGTTGCCAATAATATGCAGCTGTCTGAGAGGTTTCGAGCCGAGAAACCGAGAGGAATGGAATAGGCAAAACTGGACTAGTGGATGTGTGAGAAGGGAAGCACTGCAGTGTAAGAGGAGTGGAGCCAGCAAAGAAGATGGGTTTGTGAAACTGCAGATGTCTAAAGTGCCAGATTTTGCACACCAGTCATCTGTTTCTGTTGACACATGCAGAACTGAGTGCCTGAATAATTGCTCTTGTACAGCATATGCATATGATGCTGCCATTGGCTGTATGTCTTGGAGTGGAGAGTTAATTGACATAGTAAGGTTCTCACGTGGAGGAGTTGATCTTTACATTCGCCAAGCTCATTCAGAACTCGATGTGGGGAGAAACATGACATCAATTATCATAGTTACAGTGATAGTAGGAACACTGCTTGTTGCTACTTGTGCATATTTCTTGTGGACATGGACTTCTAAGAGTTCTGCAAGAATGGAAAGCCAACCATCGTTGGTGCTGAGGGAAACCCCTCCAGAAAACCGAAATGCAGGTCTTAGTGGAGATCTGAATCAAGTTAAAATCCAGGACCTTCCAGTATTTAACTTTGAAAACATTGCAACTGCAACAAATTACTTCAATTTAGCTAATAAGCTAGGCCAGGGTGGTTTTGGTTCAGTGTATAAGGGAGTATTGCAAGATGGACAAGAAGTAGCAGTGAAAAGACTTTCAAGAACATCTAGACAGGGGACAGAAGAATTTATGAATGAAGTGACTGTAATTTCAAAACTTCAACACCGTAATCTCGTAAGACTCCTAGGTTGCTGTATTGAAGGGGAGGAAAAGATGTTGATCTTTGAGTACATGCCCAATAAGAGTTTAGATTTTTATCTGTTTGatccagtcaaaaagCAACCCGCGTTCATACAAAGACAAATTGAGTTGAGAGGAGAGTCGTCTCAACAGAGTCACAATTCAAATTCCATCAATAATGTCACTGTCACAAATTTGCAAGGTAGATAG 1899 0.4165 MGFSTGGNTLPVFLILSNFYMNWVTALDIITVSRLMKDPETVTSNDGAFKLGFFSPGNTSNRYVGIWYLSESNVIWVANRGQPLEDSSGVVTISDDRNLVVLNGRKQVVWSSNVSNIESNSTAQLLNTGNLVLLDNITGKTIWESFKHPSNTFTPNMIISTNQVTGEKVKVTSWKSLSDPAIGTFSGSLERLSVPEVFVWNQTQPCSGPWNGQVFIGLATMYTSAYLNGFSVERENSVTVQITYTLPNDSFFGTIFLSPEGRMVYTSWINRQLVGKRVIQQSNCDIYGFCGAYGSCDSNKLPIICSCLRGFEPRNREEWNRQNWTSGCVRREALQCKRSGASKEDGFVKLQMSKVPDFAHQSSVSVDTCRTECLNNCSCTAYAYDAAIGCMSWSGELIDIVRFSRGGVDLYIRQAHSELDVGRNMTSIIIVTVIVGTLLVATCAYFLWTWTSKSSARMESQPSLVLRETPPENRNAGLSGDLNQVKIQDLPVFNFENIATATNYFNLANKLGQGGFGSVYKGVLQDGQEVAVKRLSRTSRQGTEEFMNEVTVISKLQHRNLVRLLGCCIEGEEKMLIFEYMPNKSLDFYLFDPVKKQPAFIQRQIELRGESSQQSHNSNSINNVTVTNLQGR 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02215 632 SUPERFAMILY Protein kinase-like (PK-like) 486 595 IPR011009 -
Gma13g02215 632 Gene3D - 24 147 IPR036426 -
Gma13g02215 632 SMART tyrkin_6 505 624 IPR020635 GO:0004713|GO:0006468
Gma13g02215 632 Pfam S-locus glycoprotein domain 207 314 IPR000858 GO:0048544
Gma13g02215 632 SUPERFAMILY alpha-D-mannose-specific plant lectins 64 180 IPR036426 -
Gma13g02215 632 ProSiteProfiles Bulb-type lectin domain profile. 27 146 IPR001480 -
Gma13g02215 632 Pfam Protein tyrosine and serine/threonine kinase 506 593 IPR001245 GO:0004672|GO:0006468
Gma13g02215 632 ProSitePatterns Protein kinases ATP-binding region signature. 511 533 IPR017441 GO:0005524
Gma13g02215 632 SMART blect_4 33 149 IPR001480 -
Gma13g02215 632 MobiDBLite consensus disorder prediction 608 632 - -
Gma13g02215 632 ProSiteProfiles PAN/Apple domain profile. 336 415 IPR003609 -
Gma13g02215 632 Gene3D Phosphorylase Kinase; domain 1 474 580 - -
Gma13g02215 632 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 22 596 - -
Gma13g02215 632 CDD PAN_AP_plant 334 413 - -
Gma13g02215 632 SMART ntp_6 342 414 IPR003609 -
Gma13g02215 632 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 22 596 - -
Gma13g02215 632 CDD B_lectin 37 149 IPR001480 -
Gma13g02215 632 ProSiteProfiles Protein kinase domain profile. 505 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g02215 632 Pfam D-mannose binding lectin 74 175 IPR001480 -
Gma13g02215 632 Pfam PAN-like domain 341 400 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02215 Gma-Chr13 37086129 37089365 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02215 493 596 Receptor kinase-like Gene Family AT4G11460 65.385 3.86e-38 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma13g02215 PK_Tyr_Ser-Thr 1.3e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02215 - - gmx:112998788 1208.36