Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02213 ATGAATCACGGGATAGACATAAACCTCGTTAACTGCACAGTTGCATGGTTTAAGAAGACATCATCACACTATATTCACAGTTCTGCAGACACAGTGACAGTGTTGAGCACTAATATTATGGGATTCCTAAATGCTTTGCTCATAGTATTTCCCATCATTTTCCTGGGTTTGACCTCTGCCACGGACACCCTTACATCTTCTCAATCCATTAGAGACTCAGAGACAGTAGTAACTTCAAACGACAGTGTCTTCAAACTTGGTTTCTTCAGCCCTCAAAATTCAACACACCGCTACGTAGGAATCTGGTACCTCTCTGACTCCAACGTCATATGGATAGCTAACAGAAACAAACCACTCTTAGATTCTTCTGGGGTTTTGAAAATCTCCAAAGACGGTAACCTCGTGCTAGTTGATGGAAAAAACCATGTTATTTGGTCGTCAAATGTGTCAAACACTGCAACAATCACTTCCACCGCTCAACTTTCACGTTCCGGGAATCTAGTGCTGAAAGATGACTCCACTGGACAGACCCTATGGGAGAGCTTCAAGCATCCTTGTGATTCAGCAGTGCCAACCATGAGGATCAGTGCTAACAGAATCACAGGTGAGAAAATACGGTTTGTGTCGAGGAAAAGCGCTTCTGATCCTTCTACTGGCTACTTCTCTGCTTCCCTTGAACGTTTGGATGCTCCAGAAGTGTTTTTGTGGATTAATGGAACTCGCCCTTATTGGAGGACTGGTCCATGGAATGGTAGAATCTTCATTGGGACACCACTGATGTCAACTGGGTATTTGTATGGATGGAATGTAGGATATGAAGGGAATGAAACTGTTTATCTAACTTACAGTTTCGCCGATCCTTCTTCGTTTGGAATCCTTACCTTGATTCCACAAGGAAAGCTTAAATTGGTAAGGTATTATAACAGAAAGCACACGTTGACTTTGGATTTGGGAATTTCTGATTGTGATGTTTATGGCACGTGTGGGGCATTTGGAAGCTGTAATGGGCAGAATTCACCAATATGCAGCTGTTTGAGTGGATATGAACCAAGGAATCAAGAGGAGTGGAGTAGGCAAAATTGGACTAGTGGGTGTGTGAGAAAGGTGCCACTCAAGTGTGAGAGGTTTAAAAATGGGAGTGAAGATGAGCAAGAAGATCAATTTTTGAAACTTGAAACTATGAAAGTTCCAGACTTCGCGGAGAGGTTGGATGTCGAGGAAGGTCAATGTGGAACGCAGTGCTTGCAGAATTGCTCTTGTTTGGCGTATGCATATGATGCTGGCATTGGATGCTTGTATTGGACTAGAGACTTAATTGACTTACAAAAATTCCAAACTGCAGGAGTTGATCTCTACATCCGTCTCGCCCGTTCAGAATTTCAATCCAGTAATGCACAAGAGCATACTAATAAGACAAGAGGCAAGAGATTAATCATTGGAATTACAGTGGCAACTGCTGGAACAATTATCTTTGCCATCTGTGCTTATCTAGCCATTCGTAGATTTAACTCGTGGAAGGGAACTGCTAAAGATTCGGAAAATCAGAGTCAAAGGGTGACTGAGGTCCAGAAACCAGCTAAACTGGATGAGCTACCGCTATTTGATTTTGAAGTCGTTGCAAATGCCACAGACAACTTTCACTTAGCTAATACGCTTGGAAAGGGCGGTTTCGGTCCGGTGTACAAGGGATTATTGCCAGATGGCCAGGAAATTGCAGTGAAAAGACTCGCCAAAGCATCTGGACAAGGTCTAGAAGAATTTATGAATGAAGTGGGGGTCATTTCTAAGCTACAACATCGCAATCTTGTAAAACTTCTCGGATGCTGTGTTGAAGGAGATGAAAAGATGCTCATCTATGAGTTCATGCCAAATAAAAGTTTAGATGCATTCATCTTTGACCCACTCCGGCAGAAactgctagactggacaaaacgttttaatataattgaaggagttgctcgtggcttactctatcttcatagagattctagattaaaaatcatacatagagatttgaaggcaagcaatatcttgctagatgcagagatgaatccaaaaatatcagactttggtttggctagaatatataaaggcgaggatgaagttaataccaaaagagttgttggcacatatggctacatgtccccggaatatgcaatggaaggactgttttctgagaaatcagatatctatagctttggtgttttgttattggagattattagtggaaaaagaaacactagttttcgtaatgatgaCCAGTCTCTCAGCCTTATAGGATATGCGTGGAATCTATGGAACGAAGACAATATTAGTTTTTTGGTTGATCCAGAGATATCAGCTTCAGGATCCGAGAATCATATTTTTAGGTGCATTCACATAGCATTTCTATGCGTGCAAGAAGTTGCAAAAACAAGACCAACTATGACTACTGTGCTTTCGATGCTTAATAGTGAGATTTCCCACCTCCCTCCTCCTAGGCAAGTCGGATTTGTTCAGAAGCAAAGTTCATCAAGTTTAGAGTCTTCTTCTCAAGAAAATCAGTTTAACTCCAACAACCATGTAACTCTTACCGAGATGCAAGGCAGATAA 2592 0.3669 MNHGIDINLVNCTVAWFKKTSSHYIHSSADTVTVLSTNIMGFLNALLIVFPIIFLGLTSATDTLTSSQSIRDSETVVTSNDSVFKLGFFSPQNSTHRYVGIWYLSDSNVIWIANRNKPLLDSSGVLKISKDGNLVLVDGKNHVIWSSNVSNTATITSTAQLSRSGNLVLKDDSTGQTLWESFKHPCDSAVPTMRISANRITGEKIRFVSRKSASDPSTGYFSASLERLDAPEVFLWINGTRPYWRTGPWNGRIFIGTPLMSTGYLYGWNVGYEGNETVYLTYSFADPSSFGILTLIPQGKLKLVRYYNRKHTLTLDLGISDCDVYGTCGAFGSCNGQNSPICSCLSGYEPRNQEEWSRQNWTSGCVRKVPLKCERFKNGSEDEQEDQFLKLETMKVPDFAERLDVEEGQCGTQCLQNCSCLAYAYDAGIGCLYWTRDLIDLQKFQTAGVDLYIRLARSEFQSSNAQEHTNKTRGKRLIIGITVATAGTIIFAICAYLAIRRFNSWKGTAKDSENQSQRVTEVQKPAKLDELPLFDFEVVANATDNFHLANTLGKGGFGPVYKGLLPDGQEIAVKRLAKASGQGLEEFMNEVGVISKLQHRNLVKLLGCCVEGDEKMLIYEFMPNKSLDAFIFDPLRQKLLDWTKRFNIIEGVARGLLYLHRDSRLKIIHRDLKASNILLDAEMNPKISDFGLARIYKGEDEVNTKRVVGTYGYMSPEYAMEGLFSEKSDIYSFGVLLLEIISGKRNTSFRNDDQSLSLIGYAWNLWNEDNISFLVDPEISASGSENHIFRCIHIAFLCVQEVAKTRPTMTTVLSMLNSEISHLPPPRQVGFVQKQSSSSLESSSQENQFNSNNHVTLTEMQGR 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02213 863 SUPERFAMILY Protein kinase-like (PK-like) 530 850 IPR011009 -
Gma13g02213 863 Gene3D Phosphorylase Kinase; domain 1 504 621 - -
Gma13g02213 863 CDD B_lectin 67 185 IPR001480 -
Gma13g02213 863 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 51 862 - -
Gma13g02213 863 Gene3D - 57 183 IPR036426 -
Gma13g02213 863 SMART serkin_6 546 821 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g02213 863 Pfam Protein tyrosine and serine/threonine kinase 547 815 IPR001245 GO:0004672|GO:0006468
Gma13g02213 863 Pfam D-mannose binding lectin 109 211 IPR001480 -
Gma13g02213 863 SMART ntp_6 383 455 IPR003609 -
Gma13g02213 863 PIRSF SRK 33 863 IPR024171 GO:0004674
Gma13g02213 863 Pfam S-locus glycoprotein domain 244 351 IPR000858 GO:0048544
Gma13g02213 863 Gene3D Transferase(Phosphotransferase) domain 1 622 823 - -
Gma13g02213 863 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 51 862 - -
Gma13g02213 863 CDD STKc_IRAK 552 817 - -
Gma13g02213 863 ProSitePatterns Serine/Threonine protein kinases active-site signature. 667 679 IPR008271 GO:0004672|GO:0006468
Gma13g02213 863 CDD PAN_AP_plant 369 456 - -
Gma13g02213 863 ProSiteProfiles Bulb-type lectin domain profile. 61 182 IPR001480 -
Gma13g02213 863 ProSiteProfiles Protein kinase domain profile. 546 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g02213 863 Pfam PAN-like domain 383 441 IPR003609 -
Gma13g02213 863 SMART blect_4 67 185 IPR001480 -
Gma13g02213 863 SUPERFAMILY alpha-D-mannose-specific plant lectins 99 251 IPR036426 -
Gma13g02213 863 ProSiteProfiles PAN/Apple domain profile. 373 456 IPR003609 -
Gma13g02213 863 MobiDBLite consensus disorder prediction 834 863 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02213 Gma-Chr13 37075272 37079151 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02213 469 844 Receptor kinase-like Gene Family AT4G05200 50.524 8.83e-124 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma13g02213 PK_Tyr_Ser-Thr 8.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02213 - - gmx:112998788 1727.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00616 15 5045288 5064638 Gma13g02213 13 37075272 37079151 GST
Gma13g02213 13 37075272 37079151 Gma07g01830 07 39494503 39498948 PCT
Gma13g02213 13 37075272 37079151 Gma08g00576 08 4756015 4761037 PCT