Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02211 ATGGATTTCACAAGTCTGATACTTGCTCTGGTCATAGTTTGCTGTTTTTGTCAGTGCTTAAGTTCTGGCAACGATACCATTACACCAGGCCAATTCATCAGAGATCCTCACACTCTCACCTCAGCTAATAGTGCCTTCAAGCTAGGATTCTTCAGCCCTCAAAATTCTTCAAATCGCTACCTGGGAATCTGGTATCTCTCTGACTCCAATGTCATATGGGTAGCTAACAGAAACCAGCCACTAAAGAAGAGCTCTTCCGGAACTGTTCAAATTTCTGAGGATGGCAATCTCGTGGTATTAGATAGCAACAAAAGGGCTGTTTGGTCAACAAATTTGACACATAATATTGCAACCAATTCAACTGCCAAACTTTTAGAGACTGGAAATCTAGTCCTCCTAGATGATGCATCGGGGCAAACTACATGGGAGAGTTTCCGACATCCTTGTCATGCTCTCGTGCCAAAGATGAAGTTTGGTAGTAACCAAAAAACAGGTGAGAAAATACGCATAACATCATGGAGAAGTGCTTCTGATCCTTCTGTTGGATACTATTCTACTACTCTTGAACACCCAAACACTCCAGAAATGTTTTTCTGGTTGAATGAAACGCGACCATATCATCGGTCTGGTCCGTGGAATAGCCAGATTTTTATTGGCTCAACTGAGATGTCACCTGGTTATCTAAGTGGATGGAATATAATGAATGATGTAGATGATGAAACTGTTTATCTTTCTTATACTCTGCCAAATCAATCTTACTTTGGAATCATGACCTTGAATCCACATGGTCAAATTGTATGCTCCTGGTGGTTCAATGAAAAGTTAGTTAAGAGGATGGTGATGCAAAGAACTTCCTGCGATCTTTATGGATATTGTGGGGCATTTGGAAGCTGTAGTATGCAGGATTCTCCAATATGCAGCTGTTTGAATGGATATAAGCCCAAAAATGTGGAGGAGTGGAATAGAAAAAATTGGACTAGTGGGTGTGTAAGGAGTGAGCCACTGCAATGTGGGGAACACACAAATGGAAGTAAAGTCAGCAAAGATGGGTTTTTGAGGCTTGAGAATATCAAAGTGCCAGATTTTGTACGAAGATTAGATTATTTGAAAGATGAATGCAGAGCTCAGTGTTTGGAGAGTTGCTCTTGCGTGGCCTACGCATATGACAGTGGCATTGGATGCATGGTTTGGAGTGGAGACTTGATCGACATACAGAAATTCGCAAGTGGAGGGGTTGATCTTTACATTCGTGTGCCACCTTCAGAACTTGAAAAACTTGCAGATAAAAGAAAACACAGGAAATTTATAATTCCAGTTGGAGTAACTATAGGAACGATTACTTTGGTTGGCTGTGTTTATCTCTCATGGAAATGGACTACTAAACCAACAGGTAATGTATATTCACTAAGACAGAGAATGAACAGAGATCACAATGAAGTCAAATTGCATGATCAGTTGCCACTTTTTAGTTTTGAAGAACTTGTAAATGCTACAAACAATTTTCACTCAGCCAACGAACTAGGCAAGGGAGGTTTTGGTTCAGTATATAAGGGACAATTGAAAGatggacatgaaatagcagtaaaaagactttcaaaaacctctggacaagggttagaagaatgtatgaatgaggttttagttatatcaaagcttcaacatcgcaatcttgtcagacttcttggctgctgtattaaaaagaaggaaaatatgttggtatacgagtacatgcctaacaagagtttggatGTAATATTATTTGATCCAGTCAAAAAGAAAGATCTAGATTGGCCAAAACGCTTCAACATTATTGAAGGAATCTCTCGAGaatctttggaggcaatgatatacagaccaatactagaagggttgttggaacatttggttatatgcctccagaatatgcattccgaggactggatttGCTTGGAAATTATGGAATGA 1944 0.3426 MDFTSLILALVIVCCFCQCLSSGNDTITPGQFIRDPHTLTSANSAFKLGFFSPQNSSNRYLGIWYLSDSNVIWVANRNQPLKKSSSGTVQISEDGNLVVLDSNKRAVWSTNLTHNIATNSTAKLLETGNLVLLDDASGQTTWESFRHPCHALVPKMKFGSNQKTGEKIRITSWRSASDPSVGYYSTTLEHPNTPEMFFWLNETRPYHRSGPWNSQIFIGSTEMSPGYLSGWNIMNDVDDETVYLSYTLPNQSYFGIMTLNPHGQIVCSWWFNEKLVKRMVMQRTSCDLYGYCGAFGSCSMQDSPICSCLNGYKPKNVEEWNRKNWTSGCVRSEPLQCGEHTNGSKVSKDGFLRLENIKVPDFVRRLDYLKDECRAQCLESCSCVAYAYDSGIGCMVWSGDLIDIQKFASGGVDLYIRVPPSELEKLADKRKHRKFIIPVGVTIGTITLVGCVYLSWKWTTKPTGNVYSLRQRMNRDHNEVKLHDQLPLFSFEELVNATNNFHSANELGKGGFGSVYKGQLKDGHEIAVKRLSKTSGQGLEECMNEVLVISKLQHRNLVRLLGCCIKKKENMLVYEYMPNKSLDVILFDPVKKKDLDWPKRFNIIEGISRESLEAMIYRPILEGLLEHLVICLQNMHSEDWICLEIME 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02211 647 Gene3D Phosphorylase Kinase; domain 1 463 576 - -
Gma13g02211 647 SUPERFAMILY Protein kinase-like (PK-like) 479 608 IPR011009 -
Gma13g02211 647 Pfam PAN-like domain 346 404 IPR003609 -
Gma13g02211 647 SUPERFAMILY alpha-D-mannose-specific plant lectins 61 179 IPR036426 -
Gma13g02211 647 Pfam S-locus glycoprotein domain 208 316 IPR000858 GO:0048544
Gma13g02211 647 SMART ntp_6 346 418 IPR003609 -
Gma13g02211 647 ProSiteProfiles PAN/Apple domain profile. 337 419 IPR003609 -
Gma13g02211 647 Pfam Protein tyrosine and serine/threonine kinase 504 602 IPR001245 GO:0004672|GO:0006468
Gma13g02211 647 SMART tyrkin_6 501 646 IPR020635 GO:0004713|GO:0006468
Gma13g02211 647 ProSitePatterns Protein kinases ATP-binding region signature. 507 529 IPR017441 GO:0005524
Gma13g02211 647 ProSiteProfiles Protein kinase domain profile. 501 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g02211 647 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 18 612 - -
Gma13g02211 647 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 18 612 - -
Gma13g02211 647 SMART blect_4 30 148 IPR001480 -
Gma13g02211 647 CDD B_lectin 38 148 IPR001480 -
Gma13g02211 647 Gene3D - 19 145 IPR036426 -
Gma13g02211 647 CDD PAN_AP_plant 334 419 - -
Gma13g02211 647 Pfam D-mannose binding lectin 71 174 IPR001480 -
Gma13g02211 647 ProSiteProfiles Bulb-type lectin domain profile. 24 145 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02211 Gma-Chr13 37056327 37059645 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02211 489 609 Receptor kinase-like Gene Family AT4G23320 63.636 2.56e-44 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma13g02211 PK_Tyr_Ser-Thr 3.7e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02211 - - gmx:106794168 1270.76