Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02208 ATGAGGAAGTGTGAGCTCTGTAACAGTCCCGCGAAGTTGTTCTGCGAATCAGATCAAGCCAGCCTCTGTTGGAAATGCGATGCTAAGGTTCACAGTGCAAACTTCCTCGTCACCAAACATCCCAGGATTCTTCTCTGCCATGTTTGTCAATCACTAACAGCGTGGCACGGCACAGGACCCAAGTTTGTACCCACCATGTCAGTTTGCAACACTTGTGTCAACAACAATAGTACTGAGACCTGCAGCCAACAGAATCATGAagacgatgatgatgatggtacgggagaggatcatgcagaaaacgacgatggtggtgtggctgaagatgatgatgatgatgatgatgaagaaaatcaaGTGGTTCCATGGACATCTACACCACCACCCCCAGCTTCCACTTCTTCAAATAGTGTTACAACTAGTTCTACCAGGTTCTCTGATGTTGAAGAAGGTGGCTCCGATTAA 465 0.3763 MRKCELCNSPAKLFCESDQASLCWKCDAKVHSANFLVTKHPRILLCHVCQSLTAWHGTGPKFVPTMSVCNTCVNNNSTETCSQQNHEDDDDDGTGEDHAENDDGGVAEDDDDDDDEENQVVPWTSTPPPPASTSSNSVTTSSTRFSDVEEGGSD 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02208 154 MobiDBLite consensus disorder prediction 89 119 - -
Gma13g02208 154 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 144 - -
Gma13g02208 154 MobiDBLite consensus disorder prediction 78 154 - -
Gma13g02208 154 Pfam B-box zinc finger 2 43 IPR000315 GO:0008270
Gma13g02208 154 SMART bboxneu5 1 45 IPR000315 GO:0008270
Gma13g02208 154 PANTHER B-BOX TYPE ZINC FINGER PROTEIN 1 144 - -
Gma13g02208 154 CDD Bbox1_BBX-like 3 45 - -
Gma13g02208 154 ProSiteProfiles Zinc finger B-box type profile. 1 45 IPR000315 GO:0008270
Gma13g02208 154 MobiDBLite consensus disorder prediction 130 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02208 Gma-Chr13 37035988 37036942 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02208 2 101 C2C2-CO-like Transcription Factor Family AT4G27310 49.107 3.70e-31 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gma13g02208 zf-B_box 1.2e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02208 - - gmx:100306080 267.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00621 15 5098944 5100213 Gma13g02208 13 37035988 37036942 GST