Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02166 ATGGACAATATAATCTACACTTTAGTTTTGATACTTTTTCTATCTCTGAAGGCCAGTAGTGTTTCTTCTAGAGATAGACAATGGGGCGGTGTGAGGAGAAAATTGAGCTTTGGGGATCATAATAATGGTGATCTTGTGACTAACTTGCCTGGCCAGCCTCCTGTAGATTTTCAGCACTATGCTGGATATGTCACAGTCAACGAAACCAATGGCCGAGCACTCTTTTATTGGTTCTATGAGGCCATGACCAAGCCTCAAGACAAACCATTAGTGCTGTGGCTTAATGGAGGTCCTGGGTGCTCTTCTGTGGGATATGGAGCAACACAGGAGATTGGCCCATTTTTAGTGGACACCGATGGCAAGGGCCTTAAATTCAATAACTTTTCATGGAACAAAGAGGCCAACATTTTATTCCTGGAATCTCCTGTTGGAGTTGGCTTTTCCTATTCAAATACAACCAGCGAATATGCACGACTGGGAGATGACTTCACAGCTAATGATGCTTACACTTTTCTGCACAATTGGTTCCTCAAGTTTCCATCATATATAACAAGGACATTTTATATAGCAGGAGAGAGCTATGCAGGAAAGTATGTACCGGAGCTAGCTGAACTCATCCACGATAGAAACAAGGACCCTTCCCTTCACATTGATCTCAAGGGAATTTTGCTGGGCAACCCTGAAACATCTGATGCTGAGGACTGGTCAGGTATGGTTGATTATGCTTGGAGCCATGCAGTGATATCTGATGAAACTTACAAAACTATCAAAGCAAGCTGTGAGTTCAATAGCAGTGATCCGTGGAGTAACAAAGATTGTACTCAAGGAGTGGATGAAACACTCAAACAGTACAATGAAATTGATATCTACAGCCTCTACACCTCTGTCTGCTTCGCTAGTACAGCGCGGTCAAACGATCAATCCAAGAAAATGGTGATGAATCGCTCATCTAAAATGATGCCACGGATCATGGGAGGTTATGATCCATGTTTGGATAATTATGCTAAAACTTTTTATAATAGACCAGATGTTCAGAAGGCAATCCATGCCAGTGATGGTTACAATCTGAGGAATTGGAGTATTTGCAATGAAAACATATTCAAGGGCTGGGCACAATCGAAGCCTTCTGTTATCCCAATCTACAAGAAGCTTATTTCAGCAGGACTTAGGATTTGGGTTTACAGTGGAGACACTGATGGTAGGGTGCCAGTGCTATCAACAAGATACAGCTTAAGTATTCTAGGTTTGCCTATCACTAAGAGATGGAGGCCTTGGTACCATGAAAAGGAGGTTAGTGGGTGGTATCAAGAATACGAGGGGCTTACGTTTGCGACATTTCGGGGAGCTGGCCATGCAGTGCCTTGTTTCAAACCAAGCAACTCATTGGCATTCTTCTATTCCTTTCTTCTTGGAGAATCACCACCGTCCACAAAATAA 1437 0.428 MDNIIYTLVLILFLSLKASSVSSRDRQWGGVRRKLSFGDHNNGDLVTNLPGQPPVDFQHYAGYVTVNETNGRALFYWFYEAMTKPQDKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGKGLKFNNFSWNKEANILFLESPVGVGFSYSNTTSEYARLGDDFTANDAYTFLHNWFLKFPSYITRTFYIAGESYAGKYVPELAELIHDRNKDPSLHIDLKGILLGNPETSDAEDWSGMVDYAWSHAVISDETYKTIKASCEFNSSDPWSNKDCTQGVDETLKQYNEIDIYSLYTSVCFASTARSNDQSKKMVMNRSSKMMPRIMGGYDPCLDNYAKTFYNRPDVQKAIHASDGYNLRNWSICNENIFKGWAQSKPSVIPIYKKLISAGLRIWVYSGDTDGRVPVLSTRYSLSILGLPITKRWRPWYHEKEVSGWYQEYEGLTFATFRGAGHAVPCFKPSNSLAFFYSFLLGESPPSTK 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02166 478 Gene3D alpha/beta hydrolase 41 299 IPR029058 -
Gma13g02166 478 Gene3D - 330 368 - -
Gma13g02166 478 PANTHER CARBOXYPEPTIDASE 7 475 - -
Gma13g02166 478 SUPERFAMILY alpha/beta-Hydrolases 42 472 IPR029058 -
Gma13g02166 478 Gene3D - 377 471 - -
Gma13g02166 478 Pfam Serine carboxypeptidase 50 469 IPR001563 GO:0004185|GO:0006508
Gma13g02166 478 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 7 475 IPR001563 GO:0004185|GO:0006508
Gma13g02166 478 ProSitePatterns Serine carboxypeptidases, serine active site. 189 196 IPR018202 GO:0004185
Gma13g02166 478 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 138 IPR001563 GO:0004185|GO:0006508
Gma13g02166 478 PRINTS Carboxypeptidase C serine protease (S10) family signature 139 149 IPR001563 GO:0004185|GO:0006508
Gma13g02166 478 PRINTS Carboxypeptidase C serine protease (S10) family signature 175 200 IPR001563 GO:0004185|GO:0006508
Gma13g02166 478 PRINTS Carboxypeptidase C serine protease (S10) family signature 441 454 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02166 Gma-Chr13 36701089 36705512 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02166 335 472 Calmodulin-binding Proteins AT2G22960 32.374 2.80e-14 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02166 K16297 - gmx:100819700 1003.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00663 15 5454334 5459001 Gma13g02166 13 36701089 36705512 GST
Gma07g01865 07 39917024 39923740 Gma13g02166 13 36701089 36705512 PCT
Gma13g02166 13 36701089 36705512 Gma07g01865 07 39917024 39923740 PCT