Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02119 ATGGGGGAAGATGGTTATTCTTGGATTAGGAGGACAAAATTTTCACACACTGTCTGCCATCGTTTGGATCCTGCTAGGTTAGGCTCTATTCCTATCAGTGTTCAGTCAGAGCAAAAATCAAGGCCTGCTGCCTCAAAGGCTCAGAGACACCCCATAACAAACAAGCAGAGATCTTTGTCACCATTGCCTGAGACTTATCTTTCTGAGGCCTTCAGGGAAGCTAGACATGAACAGAAGAGGTTCTCCACGCCGAATCCCCGGAGGGAAAAGAGGATTATGGGGAAGTTGTTGAACAAAGATTCTAGGGAGACTAAGGAATCAAGTTCAAAGTCACCTTCGCATAGTCCAAATAGGCAAGTGAAGTCAAAGAACCGCAAGGATTCAGCATGGACTAAGCTTTTGGACAATGGTGGAGGAAAGATTACTGCTGTGGAAACAGCTGAAGAGTGGAATGTTGACATGTCTCAATTGTTTTTTGGCCTAAAGTTTGCTCATGGTGCACATAGTCGACTTTACCATGGTGTATATAAGGAGGAGGCTGTTGCTGTTAAAATCATTATGGTACCTGAGGATGATGAAAATGGAGCTTTGGCTTCTCGATTAGAGAAACAGTTCATTAGAGAAGTCACCCTTTTATCTCGTCTTCACCATCAAAATGTCATAAAGTTCTCAGCAGCATGCAGAAAGCCACCGGTTTATTGTATTATCACAGAATATCTGGCGGAAGGTTCCTTGAGGGCATATTTGCATAAATTGGAACACCAAACTGTTTCTCTACAAAAGCTAATAGCTTTTGCTCTGGATATTGCTCGCGGAATGGAATATATACATTCTCAAGgtgtcattcatcgggaccttaaaccagagaatgtcctaatcaacgaagacaatcaccttaaaattgccgattttggcattgcaTGTGAGGAAGCATCTTGTGACTTATTGGCTGATGACCCTGGCACCTACCGTTGGATGGCACCTGAGATGATCAAAAGGAAATCCTATGGGAAAAAGGTTGATGTCTACAGTTTTGGGCTTATGATATGGGAGATGTTGACTGGAACGATACCATATGAGGATATGAATCCAATACAGGCTGCTTTTGCAGTAGTAAATAAGAATTCAAGGCCGGTTATTCCATCAAACTGCCCTCCTGCGATGCGAGCTTTAATTGAGCAATGTTGGAGCTTGCAACCAGACAAGAGGCCTGAGTTCTGGCAGGTTGTGAAGATATTAGAGCAATTTGAATCTTCACTTGCCAGTGATGGAACCCTGAGCCTGGTGCCAAATCCTTGTTGGGATCATAAGAAAGGGCTTCTTCATTGGATTCAAAAGCTTGGTCCCTTGCACCAAAATAGTGGCCCTGTGCCTAAACCCAAATTCACATGA 1392 0.4088 MGEDGYSWIRRTKFSHTVCHRLDPARLGSIPISVQSEQKSRPAASKAQRHPITNKQRSLSPLPETYLSEAFREARHEQKRFSTPNPRREKRIMGKLLNKDSRETKESSSKSPSHSPNRQVKSKNRKDSAWTKLLDNGGGKITAVETAEEWNVDMSQLFFGLKFAHGAHSRLYHGVYKEEAVAVKIIMVPEDDENGALASRLEKQFIREVTLLSRLHHQNVIKFSAACRKPPVYCIITEYLAEGSLRAYLHKLEHQTVSLQKLIAFALDIARGMEYIHSQGVIHRDLKPENVLINEDNHLKIADFGIACEEASCDLLADDPGTYRWMAPEMIKRKSYGKKVDVYSFGLMIWEMLTGTIPYEDMNPIQAAFAVVNKNSRPVIPSNCPPAMRALIEQCWSLQPDKRPEFWQVVKILEQFESSLASDGTLSLVPNPCWDHKKGLLHWIQKLGPLHQNSGPVPKPKFT 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02119 463 Gene3D Transferase(Phosphotransferase) domain 1 241 427 - -
Gma13g02119 463 SUPERFAMILY Protein kinase-like (PK-like) 144 413 IPR011009 -
Gma13g02119 463 CDD STKc_MAP3K-like 164 413 - -
Gma13g02119 463 MobiDBLite consensus disorder prediction 30 132 - -
Gma13g02119 463 Gene3D Phosphorylase Kinase; domain 1 145 240 - -
Gma13g02119 463 PRINTS Tyrosine kinase catalytic domain signature 237 250 IPR001245 GO:0004672|GO:0006468
Gma13g02119 463 PRINTS Tyrosine kinase catalytic domain signature 275 293 IPR001245 GO:0004672|GO:0006468
Gma13g02119 463 PRINTS Tyrosine kinase catalytic domain signature 321 331 IPR001245 GO:0004672|GO:0006468
Gma13g02119 463 PRINTS Tyrosine kinase catalytic domain signature 340 362 IPR001245 GO:0004672|GO:0006468
Gma13g02119 463 PRINTS Tyrosine kinase catalytic domain signature 384 406 IPR001245 GO:0004672|GO:0006468
Gma13g02119 463 SMART serkin_6 157 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g02119 463 Pfam Protein tyrosine and serine/threonine kinase 162 413 IPR001245 GO:0004672|GO:0006468
Gma13g02119 463 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 3 440 - -
Gma13g02119 463 ProSitePatterns Serine/Threonine protein kinases active-site signature. 281 293 IPR008271 GO:0004672|GO:0006468
Gma13g02119 463 PANTHER TYROSINE KINASE FAMILY PROTEIN 3 440 - -
Gma13g02119 463 ProSiteProfiles Protein kinase domain profile. 157 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g02119 463 MobiDBLite consensus disorder prediction 69 109 - -
Gma13g02119 463 MobiDBLite consensus disorder prediction 31 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02119 Gma-Chr13 36287919 36291623 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02119 1 463 MAP Kinase Kinase Kinase AT5G58950 55.513 0.0 582
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Gma13g02119 PK_Tyr_Ser-Thr 5.1e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02119 - - gmx:100500590 927.932
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00709 15 5821179 5824832 Gma13g02119 13 36287919 36291623 GST
Gma07g01916 07 40402145 40405335 Gma13g02119 13 36287919 36291623 PCT
Gma13g02119 13 36287919 36291623 Gma07g01916 07 40402145 40405335 PCT