Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02118 ATGGAGAACAACCCTAGTTCATCCAGAGTTGACAGAAAATTCATTGAGAGGAATAGAAGAAATCAAATGAAAGCTCTCTTTCGCAAACTAAACTCACTTGTGCCTCATCAAAGATCAAAGGCCATTCCACTGCCGGATCAGCTAGAAGAAGCCACAAACTACATAAAGAAACTACAGATTAATCTGGAGAAAATGAAGGACAAGAAGAACATGCTACTAGGAAATGAAAGGCCAAATGAGAGAATGAATAATGATGGAAGGAGGGTGGGATTAAAATCTCCACGGATTGAAATCCAACAAATGGGTTCAGCCTTAGAGGTTGTTCTAATAACTGGGTTGGATTCTCAGTTCATGTTCGGTGAAACCATTCGTGTTCTTCATGAAGAAGGAGTAGATGTTGTTAACGCTAGTTATAAAGTTATTGAAGATGCAGTTTTCCATTCAATACACTGTCAGGACAAGGAAGAAACTGCCAACGGAGCTGCGAGGATATCTGAGAGGTTGAAGAACTTCATCCATGATTCTAGCTACAATGCTTTTTAA 543 0.3941 MENNPSSSRVDRKFIERNRRNQMKALFRKLNSLVPHQRSKAIPLPDQLEEATNYIKKLQINLEKMKDKKNMLLGNERPNERMNNDGRRVGLKSPRIEIQQMGSALEVVLITGLDSQFMFGETIRVLHEEGVDVVNASYKVIEDAVFHSIHCQDKEETANGAARISERLKNFIHDSSYNAF 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02118 180 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 7 58 IPR011598 GO:0046983
Gma13g02118 180 Pfam Helix-loop-helix DNA-binding domain 9 59 IPR011598 GO:0046983
Gma13g02118 180 Coils Coil 48 75 - -
Gma13g02118 180 PANTHER TRANSCRIPTION FACTOR BHLH162 1 173 - -
Gma13g02118 180 Gene3D - 1 86 IPR036638 GO:0046983
Gma13g02118 180 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 1 173 IPR015660 GO:0003700|GO:0006357
Gma13g02118 180 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 7 78 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02118 Gma-Chr13 36272707 36274017 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02118 3 172 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 43.094 5.28e-45 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gma13g02118 HLH 1.1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02118 - - gmx:100784418 352.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00710 15 5832160 5833459 Gma13g02118 13 36272707 36274017 GST