Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02117 ATGGGAAAAGCATTCGACATCGGAGCCGTTCCGTTCAACGCCGAGGGGTGGGGTCCGCCGGACAGCACCATCACCGGCAGCAACATCAACCTCCCTCTGAACGTCCCCTTCGCCCCCTTCTCCCGCTCCGACAAATTGGGCCGCATCGCCGACTGGACCCGCAACTTCAACAACCCGACCCGCTCCAAGAACCCCGCTGACGCCGTCTTTGACTTCACGAACGACGACGACGACGACACCTTCCACCTCGTCGACCCCAAGCCCCCGCCGCGCCCCAAATTTGGTCCCAAGTGGCGCTTCCCGCAGCAGCGCCAGCTCCCTCAGCGCCGCGACGAAGAAGTCGAGGCGAAGAAGCGCGAGCAGGAGAAGGAACGCGCCCGCCGAGATCGTCTCTACCACATGAACCGCTCAAACCCTAATCAGCAGCGCCGTGAAGCCGCTGTTTTCAAATCCTCCGTCGATATCCAACCCGAATGGAACATGCACGACCAGATCCCCTTCAGCACCTTCTCCAAGCTCTCCTTCACCGTTCCCGAACCCGAAGACCTTCTCCTCTGCGGCGCTCTGGAATACTACGACCGCACTTACGATCGCATCACGCCCAAAAACGAACGCCGCCTCGAACGCTTCAAGAATCGAAACTTCTTCAAAGTCACCACCACCGACGACCCCATCATTCGCAGACTCGCCAACGAGGACAAGGCCACCGTTTTCGCCACCGACACGATTCTGTCCACTCTCATGTGTGCCCCTCGTTCTGTTTATTCCTGGGACATTGTCGTCCAGCGTGTCGGAAACAAGCTTTTCTTTGATAAGCGCGATGGGTCGCAGCTCGATTTGCTCTCTGTTCATGAAACCTCGCAGGAGCCATTGCCTGAGTCGAAGGATGATATTAACTCTGCCCATTCGTTGAGCGTTGAGGCTGCTTATATCAACCAGAATTTCTCTCAGCAGGTGCTTATTAGGGATGGGAATAAGGTTACTTTTGATGAGGCTAACCCTTTTGCTAATGAAGGTGAGGAGGTTGCTTCTGTCGCTTATAGGTATAGGAGGTGGAAGCTTGATGATGATATGTATCTTGTTGCGAGGTGTGAGGTTCATAGTGTTGTTGACGTGAACAAGCAGAGGTCGTTCCTTACTTTGAATGCGTTGAATGAGTTTGATCCCAAGTATTCGGGTGTGGACTGGAGGCAGAAGTTGGAGACTCAGAGGGGTGCTGTGTTGGCCACTGAGCTTAAGAACAATGCAAATAAGTTGGCTAAGTGGACTGCTCAGGCTCTTTTGGCGAGCGCGGATACGATGAAGTTGGGGTATGTGTCGAGGATTCATCCCCGTGATCATTTCAATCATGTGATTTTGGCTGTGGTTGGATATAAACCCAGGGACTTTGCGGCACAGATTAATTTGAACACGACGAATATGTGGGGGATTGTGAAGTCTATTGTGGATTTGTGCATGAAATTGAATGAGGGGAAGTATGTTCTTGTGAAAGATCCATCTAAGCCCCAGGTTAGGATTTACGAGGTTCCTGCGGATGCTTTTGAAAATGACTACGTGGAGGAGCCACTTCCGGAGGATGAACAAGTTCAGCCTCCATCAGAGGGTGCTGAGGGGGGAGAGGCAACTACTACAACTAATGACGTGGAAGATAAGCAGATAGATGGTCAAGCTTAA 1674 0.5263 MGKAFDIGAVPFNAEGWGPPDSTITGSNINLPLNVPFAPFSRSDKLGRIADWTRNFNNPTRSKNPADAVFDFTNDDDDDTFHLVDPKPPPRPKFGPKWRFPQQRQLPQRRDEEVEAKKREQEKERARRDRLYHMNRSNPNQQRREAAVFKSSVDIQPEWNMHDQIPFSTFSKLSFTVPEPEDLLLCGALEYYDRTYDRITPKNERRLERFKNRNFFKVTTTDDPIIRRLANEDKATVFATDTILSTLMCAPRSVYSWDIVVQRVGNKLFFDKRDGSQLDLLSVHETSQEPLPESKDDINSAHSLSVEAAYINQNFSQQVLIRDGNKVTFDEANPFANEGEEVASVAYRYRRWKLDDDMYLVARCEVHSVVDVNKQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATELKNNANKLAKWTAQALLASADTMKLGYVSRIHPRDHFNHVILAVVGYKPRDFAAQINLNTTNMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLPEDEQVQPPSEGAEGGEATTTTNDVEDKQIDGQA 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02117 557 MobiDBLite consensus disorder prediction 537 557 - -
Gma13g02117 557 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7 3 556 IPR007783 GO:0003743|GO:0005737|GO:0005852
Gma13g02117 557 MobiDBLite consensus disorder prediction 517 557 - -
Gma13g02117 557 Hamap Eukaryotic translation initiation factor 3 subunit D [EIF3D]. 3 520 IPR007783 GO:0003743|GO:0005737|GO:0005852
Gma13g02117 557 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT D 3 556 - -
Gma13g02117 557 PIRSF Transl_init_eIF3d 1 538 IPR007783 GO:0003743|GO:0005737|GO:0005852
Gma13g02117 557 Pfam Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) 8 508 IPR007783 GO:0003743|GO:0005737|GO:0005852
Gma13g02117 557 MobiDBLite consensus disorder prediction 79 128 - -
Gma13g02117 557 Coils Coil 109 129 - -
Gma13g02117 557 MobiDBLite consensus disorder prediction 104 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02117 Gma-Chr13 36263982 36267229 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02117 3 554 Eukaryotic Initiation Factors Gene Family AT4G20980 77.474 0.0 917
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02117 K03251 - gmx:100802805 1063.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00711 15 5838566 5841384 Gma13g02117 13 36263982 36267229 GST