LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma13g02089	ATGAAATGGCACCCTGATAAGAATCCAAGCAATAAGAAAGAGGCTGAGACTAAGTTTAAACAGATATCTGAAGCCTATGAGGTTCTGAGTGATCCCCAGAAGAGAGCAATCTATGATGAGTACGGAGAAGAAGGGCTTAAAGGGCAAGTGCCACCCCCAGATGCTGGTGGACATACATTCTTCCAAACTAGGGATGGCCCAACAACGTTCAGGTTCAATCCAAGAAACGCAAATGACATTTTTGCCGAGTTTTTCGGGTTCTCGAGCCCATTTGGTGGTGGTGGCCGTGGCAGTGGCAGCAATGGAATGAGGGGTGGTTCCTTCGGTGGAATATTTGGTGATGATATATTTAGTTCATTTGGAGAAGGAAGGACCATGAGTCGGCAAGGTACACGCAAAGCACCTCCCATCGAGAAGACATTGCCTTGCACCCTTGAGGAGCTCTATAAGGGGACTACCAAAAAGATGAAGATCTCTAGGGAAATTGTTGATGCCAGCGGGAAAACTTTGCCGGTGGAGGAAATCTTAACCATTGAAATTAAACGTGGGTGGAAAAGGGGGACAAAGATTATGTTCCCTGAGAAAGGAAACGAGCAGTCAAATGTTATTGCTTCGGATCTTGTGTTTGTTATTGACGAGAAACCTCACCCTGTGTTTACCAGAGATGGTAATGATTTGGTTGTGACACAAAAGGTGTCACTTGCGGAAGCTCTAACGGGCTATACTGTCCATCTTTCAACACTCGATGGCAGGGTTCTCAACATTCCCGTAAACAATGTGATTCATCCAACCTATGAAGAGATGGTTCCCAGAGAAGGTATGCCAATTCCAAAAGACCCTTCAAAAAGGGGTAATCTTAGGATCAAATTCCCAGCAAAGTTGACGTCAGAGCAGAAAGTCGGAATTAAGAAACTTCTGCCGTATTGA	927	0.4509	MKWHPDKNPSNKKEAETKFKQISEAYEVLSDPQKRAIYDEYGEEGLKGQVPPPDAGGHTFFQTRDGPTTFRFNPRNANDIFAEFFGFSSPFGGGGRGSGSNGMRGGSFGGIFGDDIFSSFGEGRTMSRQGTRKAPPIEKTLPCTLEELYKGTTKKMKISREIVDASGKTLPVEEILTIEIKRGWKRGTKIMFPEKGNEQSNVIASDLVFVIDEKPHPVFTRDGNDLVVTQKVSLAEALTGYTVHLSTLDGRVLNIPVNNVIHPTYEEMVPREGMPIPKDPSKRGNLRIKFPAKLTSEQKVGIKKLLPY	308

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma13g02089	308	Pfam	DnaJ domain	1	39	IPR001623	-
	Gma13g02089	308	Gene3D	-	216	294	-	-
	Gma13g02089	308	PANTHER	DNAJ HOMOLOG SUBFAMILY B MEMBER 13-LIKE	1	306	-	-
	Gma13g02089	308	PANTHER	DNAJ HOMOLOG SUBFAMILY C MEMBER	1	306	-	-
	Gma13g02089	308	Gene3D	DnaJ domain	1	94	IPR036869	-
	Gma13g02089	308	PRINTS	DnaJ domain signature	14	34	IPR001623	-
	Gma13g02089	308	PRINTS	DnaJ domain signature	34	53	IPR001623	-
	Gma13g02089	308	SUPERFAMILY	Chaperone J-domain	1	93	IPR036869	-
	Gma13g02089	308	CDD	DnaJ_C	135	294	-	-
	Gma13g02089	308	Gene3D	-	136	214	-	-
	Gma13g02089	308	SUPERFAMILY	HSP40/DnaJ peptide-binding domain	131	223	IPR008971	GO:0006457\|GO:0051082
	Gma13g02089	308	ProSiteProfiles	dnaJ domain profile.	1	42	IPR001623	-
	Gma13g02089	308	ProSitePatterns	Nt-dnaJ domain signature.	19	38	IPR018253	-
	Gma13g02089	308	Pfam	DnaJ C terminal domain	137	290	IPR002939	-
	Gma13g02089	308	CDD	DnaJ	1	31	IPR001623	-
	Gma13g02089	308	SUPERFAMILY	HSP40/DnaJ peptide-binding domain	218	297	IPR008971	GO:0006457\|GO:0051082
	Gma13g02089	308	SMART	dnaj_3	1	34	IPR001623	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma13g02089	Gma-Chr13	36016178	36018426	Tandem

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma13g02089	K09510		-	gmx:100775897	513.457

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma15g00739	15	6074346	6077527	Gma13g02089	13	36016178	36018426	GST