Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02088 ATGGGGATGGACTACTATGGGATTTTGGAGGTTGACAGGAATGCCTCAGATGAAGAGTTGAAGAGAGCCTACAGAAAGCTTGCAATGAAATGGCACCCTGACAAGAACCCAACCAATAAGAAAGAGGCTGAGATTCAATTCAAACAGATATCTGAATCCTACGAGGTTCTTAGTGATCCCCAGAAGAGAGCAATTTTTGATCGGTATGGAGAAGGTGGCCTTAATGGTGGAATGCAAACACCGGATGAAGGTGTGGCTTCCTTCTTCCGAACTGGGGATGGCCCAACAGCATTTAGGTTCAATCCCAGAAACGCAAACAACATTTTTGCAGAAGTGTTTGGGTGTTCAAGCCCATTTGGTGGAATGGGAAGGGGGTTTGGCTGCGGTGGCAGTGGCAGAGGCAGAGGCATGGGCATGGGGGGTGGATCGTGGGTGTCAAGGTCCTTTGGTGGAATGTTTGGCAATGACATGTTTAGAGAAGGCAGGTCAATGAATCAAGGTCCACGCCGCAAGGCAACTCCCATTGAAAATACATTGCTTTGCAGCCTTGAGGAGCTCTACAAGGGGAGTACCAGAAAGATGAAAATCTCTAGGGAAATTACACATGCAAGCGGGAGAATTTTTCTGGTGGAGGAAATATTAAACATTGAAATCCATCCGGGCTGGAAAAAGGGAACCAAAATCACTTTCCCAGAGAAAGGAAATGAGCAGCCAAATGTCATTGCTGCAGATCTTGTGTTTATTATTGATGAGAAACCTCACAGCGTATTTACAAGAGATGGTTATGATTTGGTTGTTACACAAAAGATATCACTTAAAGAAGCTGAAGCTCTAACAGGCTACACCATCCAACTTACAACTCTAGATGGCAGGGGTCTGAACATCATCATAAACAATGTGACTGATCCAGATTATGAAGAAGTGGTCACAGGGGAAGGTATGCCAATTTCCAAAGATCCTTCAAAGAAGGGTAACCTTAGGATCAAATTCAACATCGAAATCCCAGACATAGTTGGTGCCTGA 1023 0.4477 MGMDYYGILEVDRNASDEELKRAYRKLAMKWHPDKNPTNKKEAEIQFKQISESYEVLSDPQKRAIFDRYGEGGLNGGMQTPDEGVASFFRTGDGPTAFRFNPRNANNIFAEVFGCSSPFGGMGRGFGCGGSGRGRGMGMGGGSWVSRSFGGMFGNDMFREGRSMNQGPRRKATPIENTLLCSLEELYKGSTRKMKISREITHASGRIFLVEEILNIEIHPGWKKGTKITFPEKGNEQPNVIAADLVFIIDEKPHSVFTRDGYDLVVTQKISLKEAEALTGYTIQLTTLDGRGLNIIINNVTDPDYEEVVTGEGMPISKDPSKKGNLRIKFNIEIPDIVGA 340
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02088 340 Gene3D - 254 336 - -
Gma13g02088 340 CDD DnaJ 4 59 IPR001623 -
Gma13g02088 340 Gene3D DnaJ domain 2 123 IPR036869 -
Gma13g02088 340 SMART dnaj_3 3 62 IPR001623 -
Gma13g02088 340 SUPERFAMILY HSP40/DnaJ peptide-binding domain 169 265 IPR008971 GO:0006457|GO:0051082
Gma13g02088 340 Pfam DnaJ C terminal domain 176 335 IPR002939 -
Gma13g02088 340 Pfam DnaJ domain 4 67 IPR001623 -
Gma13g02088 340 PANTHER DNAJ HOMOLOG SUBFAMILY B MEMBER 13-LIKE 1 336 - -
Gma13g02088 340 PRINTS DnaJ domain signature 6 24 IPR001623 -
Gma13g02088 340 PRINTS DnaJ domain signature 24 39 IPR001623 -
Gma13g02088 340 PRINTS DnaJ domain signature 42 62 IPR001623 -
Gma13g02088 340 PRINTS DnaJ domain signature 62 81 IPR001623 -
Gma13g02088 340 SUPERFAMILY HSP40/DnaJ peptide-binding domain 256 337 IPR008971 GO:0006457|GO:0051082
Gma13g02088 340 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 336 - -
Gma13g02088 340 Gene3D - 174 252 - -
Gma13g02088 340 SUPERFAMILY Chaperone J-domain 3 99 IPR036869 -
Gma13g02088 340 CDD DnaJ_C 175 336 - -
Gma13g02088 340 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Gma13g02088 340 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gma13g02088 Gma-Chr13 36008659 36011983 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02088 5 69 C2H2 Transcription Factor Family AT1G74250 37.681 2.13e-09 57.0