Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02087 atggaggccgaggcagagaacaacgacgtgaagaaggaagaaaacagcaatgataacaacaacaacaacaacaatgaaagtaacagcaaaattgggaattcgagtgagggtctgagcaagcccaagcgtcagatgaagacgccgtttcagcttgaaacgctcgagaaagcttatgctgttgagaattacccgtcggagactatgagggtggagttgtcggagaagttggggttgtcggatcggcagttgcagatgtggttctgtcaccggcggttgaaggacaagaaggagttgccgtcaaagaagccgcgaaaggcagcggcgttgccggattctccggtggaggagcccaagttggGGCCTGAAGTGGGTGTTGAATATGGATCCGGGTCAGGTTCGGGGTCCAGCCCGTTTGCCCGGTCGGAGTTGAGGAATGTGGTGCCTCGGGGGTACTATGAGTCACCACAGACTATAATGGAGCTTAGAGCAATTGCTTGTGTGGAGGCTCAGTTGGGGGAGCCTTTGAGGGAAGATGGACCTATTCTTGGAGTGGAGTTTGATCCGTTGCCGCCGGATGCATTTGGGGCACCCTTAGCTGTTACGGAACAGCAGAAGCGGCCAAGTCTTGCCTATGACAGTAAAATATATGAAAGACACGATGCTAGGGCAAATAAGGCTATAGCAAGGACATTCCATGAATACCCTTTTCTTCCAAACCAGTCTGGCATTAGATCCGATGTTTATGGACAACTGAACCTACCTCATTTACATGATCCAATGGATGGTCCTACCAGAACTCCTTTTCCCCTTGGAAATGAACAGCAACCCAGAGTTCATGCTCCCCAAAGTCATTCTTCTCATGTTCGCCTTTTGTCTCAACAGCAGGACAAGCTAGTGATTACCTATCCATCTCCTCCTCGAGACAATGATGTTGCACCCAAAAGGGAACCTCACACAAACATAACCAGCACTGGAATGAACTCCCATCTTACTGATCACCCAATTGTTGGACAAGACAATCCTTATGCTTTAGCTGGTGGGCAAGTTTCCCATAACGATGCAGTATTGAGGATGGAGAGGAAACGAAAGAGTGATGAAACCAAAGTTGCAAAGGAAGTTGAAGCCTATGAAATGAGGATGCGAAAAGAGCTTGAGAAACAAGATAACCTCAGACGAAAGAGTGAAGAGCGAATGAGGAAAGAAATGGAAAGACAAGATCGTGAAAGAAGGAAGGAAGAAGAGAGGTTGATGCGTGAGAAACAACGAGAAGAGGAAAGATCAAGGCGTGAGCAAAGACGGGAAATGGAACGAAGGGAAAAGTTTTTGTTGAAAGAACATTTAAGAGCTGAGAAAAGGAGGCAAAAAGAAGAGATCCGCAAAGAGAAGGAGGAAGAGAGGAGGAAAGCTGCCCTTGAGAAGGCAAATGCTCGGAGAATAGCTAAAGAATCTATGGAGCTTATCGAGGATGAACAACTGGAATTGATGGAGTTGGCTGCTGCAAGCAAGGGGCTTTCATCTATTATTCATATTGATCTTGATACTTTGCAAAACCTTGAATCATTTAGGGATTCGTTGTGTATATTTCCACCCAAGAGTGTAAAGCTGAGAAAACCATTTGCTATCCAGCCCTGGATTGACTCAGAACAGAATATCGGCAACCTTCTCATGGTTTGGAGATTCTTGATTACTTTTGCTGATGTACTTGATTTATGGCCTTTTACTCTTGACGAGTTTGTACAGGCATTTCATGACTATGATTCTAGATTGTTGGGTGAGATTCATGTTGTTCTTCTCAAAGTGATAATAAAAGACATTGAAGATGTTGCAAGGACGCCTTCTACAGGATTAGGGATGAACCAGAATGGTGCTGCTAATCCTGGAGGTGGCCATCCAGAGATTGTGGAAGGAGCATATGCATGGGGCTTTGACATACGAAATTGGCAGAAGAACTTAAATCAATTGACATGGCCAGAAGTTTTCCGACAGTTAGCATTGTCTGCGGGATTAGGACCACAGCTGAAGAAAAGAAATATTACATGGTCATATGCAATTGATAAAGACGAGGGAAAAAGCTGCAAAGATATAATTTCTACACTTCGTAATGGTTCAGCAGCTGAAAGTGCTGTGGCCAAAATGCAAGAGAGAGGTCTGTTAGCTCCTCGAAGATCAAGGCACCGGCTAACTCCTGGAACAGTTAAATTTGCAGCTTTTCATGTTCTCTCGCTGGAGGGTAGTAAGGGTTTGACAGTACTAGAGCTTGCAGAAAAAATTCAGAAATCTGGTCTTCGGGACCTGACGACCAGCAAAACACCTGAAGCATCAATTTCTGTTGCTTTGACAAGAGACACTAAATTGTTTGAAAGAATTGCTCCATCAACATATTGTGTACGAGATGCATTCAGAAAGAATCCTGCTGATGCTGACTCCATTCTTTCAGAAGCAAGAAAGAAAATTCAGATATTTGAAAATGGGTTTCTagctggtgaagatgctgatgatgttgaaagagaagaggagtcagaaagtgatgaagttgatgaggatcctgaagatgatgaTTTAGTAAATCCTTCAAGTGCAAACCAAAATTCTGAACAGTATGAGGACACAAACATTTGCTCATCAAATGGAAAAGAAAATTTGGGTCACAATGTAGATCTTATTCAAAAAGAGTTTGATACAGATCTACCTTGTTTTCCTAAGAATGGTTCGAAGGATGCTGATTGTCCAATTTCTGTCACCAGACAGCCTGTTGCTTGTGAAGATTTAAATGCTAGCAATCTTGATCAAGATAATATGGAAATTGATGAAAGCAAATCTGGAGAGTCCTGGATTCTAGGGCTTACCGAAGGAGAATATTCTGATCTTAGTGTAGAGGAGCGTCTAAACGCTCTTGTTGCGTTGGTTGGTGTGGCAAATGAAGGAAATTCGATCCGTGTTGTTCTTGAGGATCGACTGGAATCAGCAAATGCTCTGAAGAAACAAATGTGGGCTGAAGCACAGATAGATAAAGTTCGTCTGAAAGATGATAATATTAGTAAATTAGATTTTCCATCACTTACTGGGAATAAAGTCGAAACACCATACACTTATCCAGCTATGGAGGGCAACCTAAGCCCAATGCTTGACATTAATATTAACAATATTAATAATGAAGCATCACCCAGCACTGCAGAAAACCAAAAAGGAGATCCTGTAGCACAGAGCATGCCTATGGAGAAGTGCTCATCAATTCAAGATTTTGGCTCAGGTACTGGTGCAGATATCTCTCAGACTCAGGTATCTGCACAATATTCGAAAAGATCACGTTCACAGTTGAAATCTTATATTGCCCACATAGCAGAGGAGATGTATGTCTACAGGTCTTTACCCCTTGGACAAGATCGCAGACGTAACCGATATTGGCAGTTTGTTGCTTCTGCTTCTAGCAATGATCCTGGTTCAGGCAGGATCTTTGTTGAATATCATGATGGCAAGTGGAGGCTTATTGATTCTGAAGAGGCCTTTGATGCTCTTTTGACATCATTGGATTCACGTGGGATTAGGGAATCTCATTTGCGCTTAATGTTGCTAAAGATTGAGAATTCCTTTAAAGAAAATGTTCGAAAGAGGAATGCATGTTGTGCCAAAAATGGAAGCAGGGGCGAATTTTCTATTAAAATTGAAGCTAATGAAGCATGTTCTATCCCTGAGCACAATGCTGGATCTGACAGTCCTAGCAGTACCCTTCATGACTTGAATGCTGATCCATCTGAAACTTCATCATCCTTCAAAATTGAGCTTGGGAAAACTGAGAGTGAGAAGAAAGCTGCATTGAGAAGGTATCAAGATTTTCAGAAGTGGTTGTGGAAAGAATGTTATAATTCATCGGTTTTATGTGCAATGAAATATGGGATAAAGAGATGCAAACCTCAGATGGACATTTGTGATATATGTCTCAATCTTTATTTTGTTGAAGACTCTCATTGCAATTCCTGCCACCAGACTTTTCCCTCAAATAATGGATTTAATTTTTCTAAACATGCATTTCAATGTCGAGACAAGTTATCCAAAGATAATTGTATTTTGGAATATTCTCTTCCCTTGCGGACAAGATTGCTTAAGGTCCTGTTGGCTTGTATGGAGGTATCTGTTCTTTCTGAAGCATTTGAAACAAATTGGATCAATGATGTTAGGAAGCACTGGGGCATAAAGTTGAGCAAATCATCTTCTGTTGAGGAACTTTTACAGATATTGACCCTTTTTGAGAGATCACTACGGCGAGATTTTCTGTCGTTGAACTTCTCTACAACAGATGAATTGTTGGGATCAAGCAGTATGTCAGAACGTTCTGTGCAGGCTTCAACTGATCCTGAATCTGTTGCTGTGCTTCCATGGGTTCCACTAACGACTGCAGCTTTGTCTCTCAGGCTTTTTGAGATTGATTCATCCATCAGCTATGTAAAGCTTGAAAGACTTGAGCCTTGTGAGGAGAAAGAAGCAAGAGAATACATAAAGCTTCCATCAAGATATACTCACATGAAATCTAATAGGGAGGTTGAACCAGCCGAATTTGTCCATGATGAATTCACTAAAGATAAATCTGTTCCTAAGAAAATTGTACGAAATGGCAATAAACGTGGTCGAGGGACTAATGAACAAGGACGGGGTAAAAAGCTGGCTAAAAGAGTGTGCAATTCTAAACGAGATGGTGGTCGTAAGAATGCTAAGGTCACTGACAATCTAAGTCACAGATTAAAACAGCAGGCTCGAGGAACACAAGGACAAGGTGCTGGGCGAGGTCGCCGAACCATAAGGAAGCGGAGAATGGGAAAGAGAGCTGTTGAAGATTTGTTGCTTGGCCATACGACAGCCAGTCATAGCTACAAGATTGATAGAGAACCGGTGAGAAACTTGGATGAGGAATGGGATGGAGAAAAGGCGAGTCCCATGACTCCGGTACACATTGGGGTGGCTGCTGACAATAGTAACAGTGCTGAAGAGGTGGAGTCTGATGACGACAATGCTCAAGCTGTGGAATATGATCAAGGAAACTGGGAGGTAGGTTTTAATGGTGTTCCCCCCAACAGATGGAGTAGGGGTTTGGTTGGAATGAGTGATGAAGATGTGGATGCTTTTGAAGAACTTAATGACAATGGCATTGAGGAGAATGAAGAGGAAGATTCAGAAGCAGATGTTATGAGTGAGGGTTCAGATGGGATCCCAAATACGGTAGTAAATGTTGGAGGCTCAGACTCGGCTTTGTCCGAAGATTCTTCTGATTAG 5265 0.3856 MEAEAENNDVKKEENSNDNNNNNNNESNSKIGNSSEGLSKPKRQMKTPFQLETLEKAYAVENYPSETMRVELSEKLGLSDRQLQMWFCHRRLKDKKELPSKKPRKAAALPDSPVEEPKLGPEVGVEYGSGSGSGSSPFARSELRNVVPRGYYESPQTIMELRAIACVEAQLGEPLREDGPILGVEFDPLPPDAFGAPLAVTEQQKRPSLAYDSKIYERHDARANKAIARTFHEYPFLPNQSGIRSDVYGQLNLPHLHDPMDGPTRTPFPLGNEQQPRVHAPQSHSSHVRLLSQQQDKLVITYPSPPRDNDVAPKREPHTNITSTGMNSHLTDHPIVGQDNPYALAGGQVSHNDAVLRMERKRKSDETKVAKEVEAYEMRMRKELEKQDNLRRKSEERMRKEMERQDRERRKEEERLMREKQREEERSRREQRREMERREKFLLKEHLRAEKRRQKEEIRKEKEEERRKAALEKANARRIAKESMELIEDEQLELMELAAASKGLSSIIHIDLDTLQNLESFRDSLCIFPPKSVKLRKPFAIQPWIDSEQNIGNLLMVWRFLITFADVLDLWPFTLDEFVQAFHDYDSRLLGEIHVVLLKVIIKDIEDVARTPSTGLGMNQNGAANPGGGHPEIVEGAYAWGFDIRNWQKNLNQLTWPEVFRQLALSAGLGPQLKKRNITWSYAIDKDEGKSCKDIISTLRNGSAAESAVAKMQERGLLAPRRSRHRLTPGTVKFAAFHVLSLEGSKGLTVLELAEKIQKSGLRDLTTSKTPEASISVALTRDTKLFERIAPSTYCVRDAFRKNPADADSILSEARKKIQIFENGFLAGEDADDVEREEESESDEVDEDPEDDDLVNPSSANQNSEQYEDTNICSSNGKENLGHNVDLIQKEFDTDLPCFPKNGSKDADCPISVTRQPVACEDLNASNLDQDNMEIDESKSGESWILGLTEGEYSDLSVEERLNALVALVGVANEGNSIRVVLEDRLESANALKKQMWAEAQIDKVRLKDDNISKLDFPSLTGNKVETPYTYPAMEGNLSPMLDININNINNEASPSTAENQKGDPVAQSMPMEKCSSIQDFGSGTGADISQTQVSAQYSKRSRSQLKSYIAHIAEEMYVYRSLPLGQDRRRNRYWQFVASASSNDPGSGRIFVEYHDGKWRLIDSEEAFDALLTSLDSRGIRESHLRLMLLKIENSFKENVRKRNACCAKNGSRGEFSIKIEANEACSIPEHNAGSDSPSSTLHDLNADPSETSSSFKIELGKTESEKKAALRRYQDFQKWLWKECYNSSVLCAMKYGIKRCKPQMDICDICLNLYFVEDSHCNSCHQTFPSNNGFNFSKHAFQCRDKLSKDNCILEYSLPLRTRLLKVLLACMEVSVLSEAFETNWINDVRKHWGIKLSKSSSVEELLQILTLFERSLRRDFLSLNFSTTDELLGSSSMSERSVQASTDPESVAVLPWVPLTTAALSLRLFEIDSSISYVKLERLEPCEEKEAREYIKLPSRYTHMKSNREVEPAEFVHDEFTKDKSVPKKIVRNGNKRGRGTNEQGRGKKLAKRVCNSKRDGGRKNAKVTDNLSHRLKQQARGTQGQGAGRGRRTIRKRRMGKRAVEDLLLGHTTASHSYKIDREPVRNLDEEWDGEKASPMTPVHIGVAADNSNSAEEVESDDDNAQAVEYDQGNWEVGFNGVPPNRWSRGLVGMSDEDVDAFEELNDNGIEENEEEDSEADVMSEGSDGIPNTVVNVGGSDSALSEDSSD 1754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02087 1754 MobiDBLite consensus disorder prediction 1542 1574 - -
Gma13g02087 1754 Gene3D - 39 97 - -
Gma13g02087 1754 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 5 1754 IPR044977 GO:0006357
Gma13g02087 1754 MobiDBLite consensus disorder prediction 831 854 - -
Gma13g02087 1754 Pfam DDT domain 550 604 IPR018501 -
Gma13g02087 1754 MobiDBLite consensus disorder prediction 97 119 - -
Gma13g02087 1754 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 940 983 IPR028942 -
Gma13g02087 1754 SMART testlast3 548 607 IPR018501 -
Gma13g02087 1754 ProSiteProfiles DDT domain profile. 548 607 IPR018501 -
Gma13g02087 1754 Coils Coil 3 23 - -
Gma13g02087 1754 PANTHER HOMEOBOX DOMAIN PROTEIN 5 1754 - -
Gma13g02087 1754 ProSiteProfiles 'Homeobox' domain profile. 37 97 IPR001356 GO:0003677
Gma13g02087 1754 SUPERFAMILY Homeodomain-like 31 96 IPR009057 -
Gma13g02087 1754 MobiDBLite consensus disorder prediction 1713 1754 - -
Gma13g02087 1754 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1121 1193 IPR028941 -
Gma13g02087 1754 Pfam HB1, ASXL, restriction endonuclease HTH domain 730 798 IPR007759 GO:0006355
Gma13g02087 1754 ProSiteProfiles HARE-type HTH domain profile. 730 799 IPR007759 GO:0006355
Gma13g02087 1754 CDD homeodomain 42 97 IPR001356 GO:0003677
Gma13g02087 1754 MobiDBLite consensus disorder prediction 97 111 - -
Gma13g02087 1754 MobiDBLite consensus disorder prediction 1733 1754 - -
Gma13g02087 1754 MobiDBLite consensus disorder prediction 17 41 - -
Gma13g02087 1754 SMART HOX_1 39 101 IPR001356 GO:0003677
Gma13g02087 1754 MobiDBLite consensus disorder prediction 1 16 - -
Gma13g02087 1754 MobiDBLite consensus disorder prediction 1537 1601 - -
Gma13g02087 1754 Pfam Homeodomain 40 96 IPR001356 GO:0003677
Gma13g02087 1754 Coils Coil 373 479 - -
Gma13g02087 1754 MobiDBLite consensus disorder prediction 1 50 - -
Gma13g02087 1754 MobiDBLite consensus disorder prediction 385 434 - -
Gma13g02087 1754 MobiDBLite consensus disorder prediction 828 868 - -
Gma13g02087 1754 MobiDBLite consensus disorder prediction 1713 1727 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02087 Gma-Chr13 35998413 36008426 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02087 1 1684 Homeobox Transcription Factor Family AT1G28420 48.150 0.0 1318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Gma13g02087 WSD 9.3e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02087 - - gmx:100777465 3177.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01955 07 40821033 40830155 Gma13g02087 13 35998413 36008426 PCT
Gma13g02087 13 35998413 36008426 Gma07g01955 07 40821033 40830155 PCT