Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02084 ATGCTGCAACTGCTTCCTGTCTTCCTTCTTCTCCTCCTGGAACAAGCGTCTTTGATTTCTGGGCTGAACCAAGATGGTTTGTATCTGTACGAGTGGAAGCAATCTCTTGACGACCCGGACTCCTCCCTCTCCTCCTGGAACAACCGCGACGCCACCCCTTGCAACTGGGCCGGCGTCACCTGCGGCCCAAGCAACACCACCGTCACCGCACTTGACCTCTCCAACTTCAACCTTTCCGGCCCATTCTCCGCCTCCCTCCTCTGCCGCCTCCCCAACCTCACCTCCATCATCCTCTTCAACAACTCCATCAACCAAACCCTCCCTCTCCAAATTTCTCTCTGCACCCCCCTCCTACACCTCGACCTCTCCCAAAACCTCCTCACCGGCTTCCTCCCCCACACCCTCCCCCTCCTCCCTAACCTCCTCCACCTCGACCTCACCGGCAACAACTTTTCCGGcCCCATCCCTCCCTCCTTCGCCACCTTCCCCAACCTCCAAACACTCTCCCTCGTTTACAACCTCCTCGACGACGTCGTTTCACCTTCTCTCTTCAACATCACGACCCTCAAAACGCTCAACCTCTCCTTCAACCCTTTTCTCCCTTCACCCATCCCTCACTCCCTCGGCAACCTCACTAACTTAGAAACGCTCTGGCTCAGCGGCTGCAACCTCGTGGGCCCCATCCCGGAATCCCTCGGGAACCTCGTCAACCTTCGCGTCTTGGACTTCTCCTTCAACAACCTCTACGGTCCCATCCCTAGTTCGCTCACTCGCCTCACCGCTCTCACGCAGATTGAGTTCTACAACAACTCTCTCTCCGCTGAGTTTCCCAAGGGAATGTCCAACCTCACTTCGCTGAGGCTCATTGATGTTTCCATGAACCATTTGAGTGGGACCATTCCTGATGAATTGTGCCGTTTGCCTCTCGAGAGTCTTAACCTCTACGAGAACCGCTTCACCGGCGAGTTGCCGCCGAGTATTGCAGATTCACCCAACCTCTATGAACTCAGATTGTTCGGGAACAAGCTCGCCGGGAAGTTGCCGGAGAATTTGGGGAAGAATGCTCCGTTGAAGTGGCTTGATGTTTCTACAAACCGGTTCTCCGGCGGGATTCCGGAGAGTCTCTGCGAGCATGGTGAGTTGGAGGAGTTGTTGATGCTTGAGAATGAGTTCTCCGGGGAGATTCCGGCGAGTTTGGGCGGCTGTCGGAGGTTGTCGCGTGTGAGGTTGGGTACGAACCGGTTGTCCGGCGAGGTTCCGGCGGGTATGTGGGGTCTTCCGCATGTGTATTTGCTTGAACTGGGGAATAACTCGTTTAGTGGTCCAATCGCCAGGACCATTGCTGGGGCGAGGAATTTGTCGTTGTTGATTTTGTCCAAGAACAATTTCTCCGGTGTCATTCCCGACGAGATTGGGTGGTTGGAGAATCTTCAAGAGTTTTCTGGTGCTGATAACAACTTCAATGGGTCGTTGCCTGGGAGTATTGTGAATCTTGGGCAGCTTGGGACTCTTGATCTTCACAACAATGAGCTCTCTGGGGAGCTTCCCAAGGGGATTCAATCGTGGAAGAAACTCAATGActtgaatttggctaataatgaaattggtgggaagattcctgatgaaattggtattttgtcagtgttaaattttcttgatctttccaacaatgaaatttctgggaatgttcctCTTGGGTTGCAGAATTTGAAGCTCAATCTGCTCAACTTGTCTTATAATAGGCTTTCTGGAAGGCTTCCTCCACTGCTGGCTAAGGATATGTACAGGGCTAGTTTTATGGGTAATCCTGGCTTGTGTGGCGATTTCAAAGGCTTGTGTGATGGCAAAGGGGATGATGATAATAGTAAGGGTTTTGTGTGGATTCTGCGAGCTATTTTTATAGTTGCCTCTTTGGTGTTTGTTGTTGGTGTGGTATGGTTCTACTTCAGGTATAGGAATTTCAAGAATGCTGGGAGATCTGTTGATAAATCGAAGTGGACGTTGATGTCGTTTCATAAACTGGGTTTTAGCGAAGATGAGATCTTGAATTGCCTCGACGAAGATAATGTGATAGGAAGCGGGTCGTCCGGGAAGGTTTACAAGGTTGTGCTTACCAGCGGGGAATCTGTTGCCGTGAAGAAGATATGGGGCGGGGTCAAAAAGGAAATAGATAGCGGAGATGTTGAGAAGGGTCATCAGTTTCGTCAAGACAGTTCTTTTGATGCAGAGGTTGAAACTTTGGGCAAAATTAGGCACAAGAACATTGTCAAGTTGTGGTGTTGCTGCACCACTAGGGACAGCAAGCTATTGGTTTATGAGTATATGCCGAATGGTAGTCTGGGGGATTTGCTGCATAGCAATAAAGGAGGGTTGTTGGATTGGCCAACTAGGTACAAGATAGCTGTTGATGCTGCAGAAGGCCTCTCTTATTTGCATCATGACTGTGTTCCTTCAATTGTTCATAGAGATGTGAAATCTAACAACATCTTGTTGGATGGGGACTTCGGTGCAAGAGTGGCAGATTTTGGAGTAGCTAAGGTAGTCGATGCCACCGGGAAAGGAACTAAATCCATGTCCGTCATAGCTGGGTCTTGTGGGTACATTGCACCAGAATATGCATACACGCTTAGAGTGAATGAGAAGAGTGACATATATAGTTTTGGTGTTGTCATACTTGAGTTGGTTACTGGAAGGAGGCCCATAGACCCTGAATTTGGGGAAAAAGATTTGGTTATGTGGGCGTGCAACACCTTGGATCAGAAAGGTGTTGACCATGTGATCGACTCGAGGCTTGATTCTTGTTTCAAAGAAGAAATTTGCAAGGTCCTCAACATTGGTCTCATGTGCACTAGTCCTCTTCCAATCAACCGGCCTGCAATGAGAAGAGTGGTGAAGATGTTGCAAGAGGTGGGCACAGAGAACCAAACGAAACCTGCCAAGAAAGATGGAAAGTTGTCCCCTTATTACTATGACGATGGTTCGGATCATGGAAGTGTTGCTTAG 3003 0.4812 MLQLLPVFLLLLLEQASLISGLNQDGLYLYEWKQSLDDPDSSLSSWNNRDATPCNWAGVTCGPSNTTVTALDLSNFNLSGPFSASLLCRLPNLTSIILFNNSINQTLPLQISLCTPLLHLDLSQNLLTGFLPHTLPLLPNLLHLDLTGNNFSGPIPPSFATFPNLQTLSLVYNLLDDVVSPSLFNITTLKTLNLSFNPFLPSPIPHSLGNLTNLETLWLSGCNLVGPIPESLGNLVNLRVLDFSFNNLYGPIPSSLTRLTALTQIEFYNNSLSAEFPKGMSNLTSLRLIDVSMNHLSGTIPDELCRLPLESLNLYENRFTGELPPSIADSPNLYELRLFGNKLAGKLPENLGKNAPLKWLDVSTNRFSGGIPESLCEHGELEELLMLENEFSGEIPASLGGCRRLSRVRLGTNRLSGEVPAGMWGLPHVYLLELGNNSFSGPIARTIAGARNLSLLILSKNNFSGVIPDEIGWLENLQEFSGADNNFNGSLPGSIVNLGQLGTLDLHNNELSGELPKGIQSWKKLNDLNLANNEIGGKIPDEIGILSVLNFLDLSNNEISGNVPLGLQNLKLNLLNLSYNRLSGRLPPLLAKDMYRASFMGNPGLCGDFKGLCDGKGDDDNSKGFVWILRAIFIVASLVFVVGVVWFYFRYRNFKNAGRSVDKSKWTLMSFHKLGFSEDEILNCLDEDNVIGSGSSGKVYKVVLTSGESVAVKKIWGGVKKEIDSGDVEKGHQFRQDSSFDAEVETLGKIRHKNIVKLWCCCTTRDSKLLVYEYMPNGSLGDLLHSNKGGLLDWPTRYKIAVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGARVADFGVAKVVDATGKGTKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRRPIDPEFGEKDLVMWACNTLDQKGVDHVIDSRLDSCFKEEICKVLNIGLMCTSPLPINRPAMRRVVKMLQEVGTENQTKPAKKDGKLSPYYYDDGSDHGSVA 1000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02084 1000 ProSitePatterns Serine/Threonine protein kinases active-site signature. 819 831 IPR008271 GO:0004672|GO:0006468
Gma13g02084 1000 MobiDBLite consensus disorder prediction 971 1000 - -
Gma13g02084 1000 ProSitePatterns Protein kinases ATP-binding region signature. 691 714 IPR017441 GO:0005524
Gma13g02084 1000 SMART LRR_typ_2 211 234 IPR003591 -
Gma13g02084 1000 SMART LRR_typ_2 498 521 IPR003591 -
Gma13g02084 1000 SMART LRR_typ_2 546 569 IPR003591 -
Gma13g02084 1000 SMART LRR_typ_2 235 259 IPR003591 -
Gma13g02084 1000 SMART LRR_typ_2 283 307 IPR003591 -
Gma13g02084 1000 SMART LRR_typ_2 162 186 IPR003591 -
Gma13g02084 1000 SMART LRR_typ_2 90 114 IPR003591 -
Gma13g02084 1000 SMART LRR_typ_2 138 161 IPR003591 -
Gma13g02084 1000 ProSiteProfiles Protein kinase domain profile. 685 970 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g02084 1000 PANTHER LRR RECEPTOR-LIKE KINASE 8 982 - -
Gma13g02084 1000 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 8 982 - -
Gma13g02084 1000 Gene3D Ribonuclease Inhibitor 178 281 IPR032675 -
Gma13g02084 1000 SMART serkin_6 685 948 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g02084 1000 Gene3D Ribonuclease Inhibitor 282 615 IPR032675 -
Gma13g02084 1000 SUPERFAMILY Protein kinase-like (PK-like) 680 967 IPR011009 -
Gma13g02084 1000 Pfam Protein kinase domain 687 904 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g02084 1000 Gene3D Transferase(Phosphotransferase) domain 1 775 992 - -
Gma13g02084 1000 Pfam Leucine rich repeat N-terminal domain 23 61 IPR013210 -
Gma13g02084 1000 Gene3D Ribonuclease Inhibitor 22 177 IPR032675 -
Gma13g02084 1000 SUPERFAMILY L domain-like 371 606 - -
Gma13g02084 1000 MobiDBLite consensus disorder prediction 975 989 - -
Gma13g02084 1000 Gene3D Phosphorylase Kinase; domain 1 669 774 - -
Gma13g02084 1000 SUPERFAMILY RNI-like 71 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02084 Gma-Chr13 35971420 35975656 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02084 22 1000 Receptor kinase-like Gene Family AT1G28440 68.293 0.0 1360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gma13g02084 Pkinase 5.3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02084 - - gmx:100776936 1936.38