Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02081 ATGACATGGTGCAATGACTCTGACGAGAATAGGGTTATTGAATCAATCACGCCAAGAATAACTATTACTCCTAACACTGATGACAAAAAGCTCACCCAAGAAATTAGAACCACAGCATGCCCCTCGTGCGGCCATAACATTGCATTCAAAGATAAGGGTGGAATCCATGACTTGCCGGGGTTACCAGCTGGAGTTAAGTTTGACCCAAATGACCAAGAAATATTAGAACATTTGGAGGCAAAAGTTGCGTCTGATGCATGCAAGCTTCATCCCCTAATTGATGAGTTCATACCAACGCTCGAAGGCGAGAATGGGATCTGTTATACACACCCTGAAAAACTACCAGGAGTTAGCAAAGATGGGCAGATCCGCCATTTCTTTCACAGGCCCTCAAAAGCATACACGACTGGAACAAGGAAAAGAAGAAAGGTTCACACTGATGATGAAGGAATTGAAACAAGATGGCACAAAACGGGAAAAACTAGAGCAGTTTTTGCATCTGGTGGTGCAGTGAAAGGTTTTAAGAAAATACTAGTACTCTACACCAACTATGGAAGGCAAAAGAAGCCTGAGAAAACTTACTGGGTGATGCATCAATACCATCTTGGCAATACTGAAGAAGAGAAAGATGGAGAACTAGTTGTTTCAAAAGTCTTCTACCAAACACAACCTAGACAATGTGTTAATCCCATTATCATAAAGGACCCGTACGAAAAAATGTTGAATGGTGGAAGTGTCCAAGACAGCACAAATACATCAATAACTAAAACTACTGCAACTCTTTTGGATTGCTACAATGCTCCTTACATAGATTATGATCATGCCCATGCGAGTCATAATAGGGAAAGTTCCTCACAACTAATAATTCCCAGCTCGGTTGTTCAGGTTGATGGCTCTTATATTCGCTCAACAATGGATGCAAAGAAAGCAAGATTTGAAAGTAACACTGGGAAGAGCTTCTAG 963 0.4123 MTWCNDSDENRVIESITPRITITPNTDDKKLTQEIRTTACPSCGHNIAFKDKGGIHDLPGLPAGVKFDPNDQEILEHLEAKVASDACKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGQIRHFFHRPSKAYTTGTRKRRKVHTDDEGIETRWHKTGKTRAVFASGGAVKGFKKILVLYTNYGRQKKPEKTYWVMHQYHLGNTEEEKDGELVVSKVFYQTQPRQCVNPIIIKDPYEKMLNGGSVQDSTNTSITKTTATLLDCYNAPYIDYDHAHASHNRESSSQLIIPSSVVQVDGSYIRSTMDAKKARFESNTGKSF 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02081 320 SUPERFAMILY NAC domain 56 221 IPR036093 GO:0003677|GO:0006355
Gma13g02081 320 PANTHER NAC DOMAIN-CONTAINING PROTEIN 10 1 299 - -
Gma13g02081 320 Pfam No apical meristem (NAM) protein 62 202 IPR003441 GO:0003677|GO:0006355
Gma13g02081 320 Gene3D NAC domain 70 225 IPR036093 GO:0003677|GO:0006355
Gma13g02081 320 ProSiteProfiles NAC domain profile. 61 221 IPR003441 GO:0003677|GO:0006355
Gma13g02081 320 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 1 299 IPR044799 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02081 Gma-Chr13 35944802 35948516 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02081 1 227 NAC Transcription Factor Family AT4G28500 72.609 1.22e-119 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma13g02081 NAM 7.7e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02081 - - gmx:100791680 660.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00742 15 6099398 6102762 Gma13g02081 13 35944802 35948516 GST