Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02076 ATGGGGTTGATCGATCTGAACACCACGGAAGATGATGAAGCTGCTCCATTATCTGCTTCTTCTCCAGCTTCATATTCTTCTTCTTCTTCTCACTCGGGGATAAGCACTTCTGCTTCAACCTTGGTTGTTCCTCCTACTCCTCCTTCTGTGTGCTTGGAACTGTGGCACGCGTGTGCGGGCCCTTTGATCTCTCTGCCGAAGAAAGGAAGTGTTGTTGTGTACTTGCCACAGGGACACTTTGAGCATGTTCAGGATTTTCCGGTCACTGCTTATGATATCCCACCCCACGTGTTCTGTCGTGTCCTTGATGTCAAGCTCCATGCAGAGGAAGGGAGCGATGAAGTGTATTGCCAAGTGTTGTTGGTTCCTGAAAGTGAGCAAGTGGAGCAAAGCTTGCGGGAAGGGGAAATTGTTGCTGATGGGGAAGAGGAGGATACTGAAGCTATAGTGAAGTCAACAACTCCCCATATGTTCTGCAAGACTCTCACAGCTTCAGACACCAGCACTCATGGTGGATTCTCGGTGCCCCGGCGAGCAGCTGAAGATTGCTTTCCTCCCCTGGATTACAGTCAACAGAGACCTTCACAAGAGCTTGTGGCAAAGGATCTTCATGGCTTGGAATGGAGGTTTCGACATATATATAGGGGCCAACCACGGAGGCATCTGCTCACAACTGGGTGGAGTGCATTTGTGAACAAAAAGAAGCTTGTTTCTGGAGATGCTGTGTTGTTTCTTAGGGGCGACGATGGAGAACTGAGATTAGGGATTCGCAGGGCAGCTCAGTTGAAAAGTGCTGGTTCGTTTGCAGTTCCCTCTGGTCAGCAATTGAATCCTGCAACTCTCAAGGGTGTTGTTAATGCATTATCTACAAGATGTGCATTTAGTGTTTGCTACAATCCAAGGTTCAGCTCTTCAGAATTCATCATACCTGTTCACAAATTCTTAAAGAGCCTTGACTGTTCTTATTCAGTTGGAATGAGGTTCAGGATGCGTTTTGAAACTGAAGACGCGGCAGAGCGAAGATGCACTGGATTAATTGCTGGAATTAGTGATGTTGATCCAGTTAGATGGCTCGGATCAAAATGGAGATGCCTACTGGTAAGGTGGGATGACATAGAAGCTGCTAGGCGCAATAGGGTTTCCCCATGGGAAATTGAGCCATCTGGTTCTGCTTCAAATTCCAGTAACTTGATGTCAGCTGGTTTGAAGAGGACCAGGATTGGAATGACTTCAGTGAAGCTGGAATTTCCCACTCCCGATGGGATTGGAGCATCAGACTTTGGGGAATCGTTAAGGTTCCGGAAGGTCTTGCAAGGTCAAGAAATTTTGGGTGTTAATACTCCCTTTGATGGTATTAATGCTCAGAGTCCCCGGTTATACGAGTTAGGGAGGTGCTATCCTGGTTCAAACTGTTCAGGGATTCCTCCAACAGGAAATAATATCAGAATGCCGCATCCAGCGTCTGATTTTTCCTGCAATGGCATAGGCTTTAGTGAATCTTTCCGGTTCCAGAAGGTCTTGCAAGGTCAAGAAATTCTTCCAAGCCAACCATATGGAAGAGTCTTATCTATTGAGGAGGCTCGAGCAAATGGTTGCTATGGACTATATGATGGCTGTCAGTTGCTTAACACCAGAAATGGATGGTCTGCACAGATGCATGACAATGCTCCATATTTGCATGCATCTGTTACACCTGCACAAGTATCATCTCCATCATCTGTGTTAATGTTCCAGCAAGCAGTTAATCCAGTTTCAAACTGTGATTATAATAAAAACAAACGTGATAAGGAAATGGAGGGTAGAGTCCATTACCAAGGTTTATACACATCTGAAGTGAAAGGTAGAACATTTGCATCTTCCCCATTCGATGATCCTATTTTATCCACGCTAGCTCCCGAAGGTGCTAGTTCTTTGGGTATGTTTGATGTTCATAACCAGTTGGGTAGTTCACGGCCACATGAATCAGTGTCAGCATTGAGAAGCAGTCAAGAGTTGGTTTCCTCATGTAAAAGTAGTTGCAGACTCTTTGGTTTTTCATTGACTGAGGACACACATCTTGCAAAGAAAGAGGCGTCAGCCTCTACCATCACTTTACCATTGAGTTCTGGACCTTCCTTTACTAGACTTGTTGAAGATGAGTTCCATCCCGGCCATTCCCTTCCGAGTAAGGGAGTTGGAAGTAACTGCACCAAGGGTGTATTGCAGTATTGA 2211 0.4568 MGLIDLNTTEDDEAAPLSASSPASYSSSSSHSGISTSASTLVVPPTPPSVCLELWHACAGPLISLPKKGSVVVYLPQGHFEHVQDFPVTAYDIPPHVFCRVLDVKLHAEEGSDEVYCQVLLVPESEQVEQSLREGEIVADGEEEDTEAIVKSTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGLEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGIRRAAQLKSAGSFAVPSGQQLNPATLKGVVNALSTRCAFSVCYNPRFSSSEFIIPVHKFLKSLDCSYSVGMRFRMRFETEDAAERRCTGLIAGISDVDPVRWLGSKWRCLLVRWDDIEAARRNRVSPWEIEPSGSASNSSNLMSAGLKRTRIGMTSVKLEFPTPDGIGASDFGESLRFRKVLQGQEILGVNTPFDGINAQSPRLYELGRCYPGSNCSGIPPTGNNIRMPHPASDFSCNGIGFSESFRFQKVLQGQEILPSQPYGRVLSIEEARANGCYGLYDGCQLLNTRNGWSAQMHDNAPYLHASVTPAQVSSPSSVLMFQQAVNPVSNCDYNKNKRDKEMEGRVHYQGLYTSEVKGRTFASSPFDDPILSTLAPEGASSLGMFDVHNQLGSSRPHESVSALRSSQELVSSCKSSCRLFGFSLTEDTHLAKKEASASTITLPLSSGPSFTRLVEDEFHPGHSLPSKGVGSNCTKGVLQY 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02076 736 SMART B3_2 158 260 IPR003340 GO:0003677
Gma13g02076 736 Pfam Auxin response factor 285 365 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Gma13g02076 736 PANTHER AUXIN RESPONSE FACTOR 41 736 - -
Gma13g02076 736 Gene3D - 321 395 - -
Gma13g02076 736 ProSiteProfiles B3 DNA-binding domain profile. 158 260 IPR003340 GO:0003677
Gma13g02076 736 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 41 736 IPR044835 GO:0003677|GO:0006355|GO:0009725
Gma13g02076 736 SUPERFAMILY DNA-binding pseudobarrel domain 151 265 IPR015300 -
Gma13g02076 736 Pfam B3 DNA binding domain 158 259 IPR003340 GO:0003677
Gma13g02076 736 MobiDBLite consensus disorder prediction 13 29 - -
Gma13g02076 736 Gene3D - 156 260 IPR015300 -
Gma13g02076 736 CDD B3_DNA 156 258 IPR003340 GO:0003677
Gma13g02076 736 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02076 Gma-Chr13 35897278 35903190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02076 157 515 B3 DNA Binding Superfamily AT2G33860 59.780 3.90e-144 428
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Gma13g02076 B3 3.6e-22 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02076 K14486 - gmx:100789906 1441.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00747 15 6128253 6132995 Gma13g02076 13 35897278 35903190 GST