Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02065 ATGAATTTTCATGCCCAAACTTACAAAGCAGGTAAATATCTTTTGCTTTGGCCTTCTCTAAAAATCTTGCTTCTCCTATTCAAGTGCCTTATTGGAGCTCAGGTTGCCTACAGTTTCCAAAATACAAGTGTTGGCGTGGTAATTGATGCCAATTCAGAGGTTGGAAAACAACAGAAGAGAGCCATGCATATTGCAGCTCAAACTTTCAATAATAACTCAAAGAATCACAACAACATAATCCTTTTCTTCCACGACTCTGGTGGAATCCCTTTACAAGCAGCTTCAGCTGCTGAAGAACTAATCATGAAGAAGAAAGTTAAAGTGATTGTTGGCATGGGGACATGGCAAGAAGCAGCTCTAGCTGCtgaccttggaaacaaagctcaaattccaattatttcattttcttctcCTTCAATAGTCCCTCCTTTAATGCAACATCGTTGGCCTTTTTTGATTCAAATGGCTAAAGATCAGGCTGCACACATGAACTGCATAGCAGATATTATCCACGCGTACAACTGGCAGAAGGTTATAGCTATATATGAAGACAACCCTTATAGTGGTGATTCTGGATTGTTAAGCCTCTTTTCCGAGGCTCTCCAAAAGGGTAACGCGCAGATTGAGAACCGATTGGTTCTTCCACATTTCACTTCTTTATCTGATCCAAAAGGGGTTGTTCTTGATGAATTGCTTAAGCTGTTGCCACTAAAATCTCGTGTTTTTGTTGTACTTCAAGCATCATTCCCTATGGTAACTCACTTGTTCAGAGAAGCCAAGAAGATTGGATTCTTGGGGAAAGATTCGGCTTGGATAATCAACGAGGGGATCACAAGTATGTTGGACTTTGCAAATAAATCTGTTTTATCCTCTATGGAAGGTACTTTAGGAATCAAAACCTACTATTCTACAAATTCTACTGCTTATACTCATTTGCAGGAAAATTTCCAATCTGAGCATGCTGAAACAGCAGGCACTAAACCAGGATCAGATGCATTACGAGCTTATGATAGTGTTATAATCATTACAGAGGCCTTAGAGAAAATGAATAGCAAATCTAGTAACTCAAAGCCAAGGGTGTTCTTGGAGAAAATTTTATCTAGCAATTTTAATGGTTTAAGTGGTAATATAAGATTCCAAGGAAGTCATCTATCCAACACTGCAGTATTGAGAGTCATCAATGTGGTTAATAGGGAATACAAGGAATTGGACTTTTGGACCCCAAAATTCAAGTTTGCTGGATCTCTTGAAATACTGAAAGACAGAGAGACAAGGGGTGATTATGCTACAAATAACTTAGCTGGCCCAGTGGTTTGGCCAGGAGGCCTAATTTCTGCTGATCCTATTGGATGGAAAATGCCTACGGATACAGAACCTTTAAAAGTGGCAATTCCCACAAACCCTGCTTTTGTTAATTTTTTGAAGGAAGACTCCCAAAAGCAATATAGTGGTTTCTGTATTGATATTTTCCACGAGGCACGGAAAATTCTGAGTGACAAGTATTCTGGGATGCCTTATGTGTTTCACCCCTTTAATGAATCCTATGATAAACTTCTACTGAATGTCATAAACAAGTCCCATGATGTTATTGTAGGAGATGTAACAATACTTGCTGAACGATCAAAGGATGTGTGGTTCACTCAGCCATACACTGAGTCAGGCTTATCACTTATTCTTCCAATAGAGACTGAAGGGTCAGCATGGTTGTTTATGAAACCTTTTAGCTCGGAAATGTGGATCGCAACTATTGGAATCCTCATCTACACAATGTTTATCGTATGGTTCCTGGAGCATCACTTGAATCCAGATTTTGGTGGACCATTGAAAAATCAGATCAGCACAACACTGTGGTTTGCTTTTTCTTCTCTATTTTTTGCTCATAAGGAGAAAATAAACAGCAACTCTGCACGAGTAGTAGTTGGTGTATGGCTATTTCTTGTGTTTGTTCTAACCTCAAGCTACACTGCCAATCTTTCGTCATTACTTACTGTCAAACGATTGAAATCTGGAAGAGATGTTGAGTGGCTAAAGCAAAACAACTTATCAGTTGGTTGTGATAACAGCAGTTCGTTTGTAAAGAACTACATGATAAATGTGTATAATTTCACACCACAGCAAATAATAGAGGTGGATGGTGAACATGACATTGTGGATAAATTCAAAAGCAAAAATATTTCTGCCCTCTTTCTTGAGAGCCCGTATGAGAAGGTATTCATGAATAAGTACTGCAAGGATTACACTGCAGTTACAGCTGCCAATAAATTTGGAGGACTTGGCTTTGTATTTCAAAAGGGATCTCCCATGGCAAGAGACTTTTCAGGAGCCATTTTAACACTAGCAGAAATGGGAAAGCTAAAAACTTTGGAAGAGATATGGTTGACCCCTCCAAATGAATGCTCAAATGGCTCAACATCTCCAGAAACTGAGAGCCTGACCCTCCACAACTTTTGGGGTCTCTATATCATATGTGCTGCCATATCCACCATATGCTTTGTGATGGCCTTATTGAAAAATCACTTAAATAAGCATAACCATATTGAAGAGGAAGATCAACATCAAGACAGTGCAACAGCTGATGATGATAGTGTTTGGAAGAAAGCACTCAGAATTGGTACAGGCTTTTACAATAATGTGAATAACAAAACTTTAGGTAGAGCTGCAACTTTTGGTGGAATGCAGCTTACACGCCGCCGGAATTCCTCAAGATGGCAGAGTATAAGCACTTCTGATGATGTGGCTAATCCACAGAGTTCTCAGTCAGCAGTCAAAGATATGCTGTAA 2781 0.3876 MNFHAQTYKAGKYLLLWPSLKILLLLFKCLIGAQVAYSFQNTSVGVVIDANSEVGKQQKRAMHIAAQTFNNNSKNHNNIILFFHDSGGIPLQAASAAEELIMKKKVKVIVGMGTWQEAALAADLGNKAQIPIISFSSPSIVPPLMQHRWPFLIQMAKDQAAHMNCIADIIHAYNWQKVIAIYEDNPYSGDSGLLSLFSEALQKGNAQIENRLVLPHFTSLSDPKGVVLDELLKLLPLKSRVFVVLQASFPMVTHLFREAKKIGFLGKDSAWIINEGITSMLDFANKSVLSSMEGTLGIKTYYSTNSTAYTHLQENFQSEHAETAGTKPGSDALRAYDSVIIITEALEKMNSKSSNSKPRVFLEKILSSNFNGLSGNIRFQGSHLSNTAVLRVINVVNREYKELDFWTPKFKFAGSLEILKDRETRGDYATNNLAGPVVWPGGLISADPIGWKMPTDTEPLKVAIPTNPAFVNFLKEDSQKQYSGFCIDIFHEARKILSDKYSGMPYVFHPFNESYDKLLLNVINKSHDVIVGDVTILAERSKDVWFTQPYTESGLSLILPIETEGSAWLFMKPFSSEMWIATIGILIYTMFIVWFLEHHLNPDFGGPLKNQISTTLWFAFSSLFFAHKEKINSNSARVVVGVWLFLVFVLTSSYTANLSSLLTVKRLKSGRDVEWLKQNNLSVGCDNSSSFVKNYMINVYNFTPQQIIEVDGEHDIVDKFKSKNISALFLESPYEKVFMNKYCKDYTAVTAANKFGGLGFVFQKGSPMARDFSGAILTLAEMGKLKTLEEIWLTPPNECSNGSTSPETESLTLHNFWGLYIICAAISTICFVMALLKNHLNKHNHIEEEDQHQDSATADDDSVWKKALRIGTGFYNNVNNKTLGRAATFGGMQLTRRRNSSRWQSISTSDDVANPQSSQSAVKDML 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02065 926 Gene3D - 158 407 - -
Gma13g02065 926 PIRSF IGluLR_plant 14 924 IPR017103 -
Gma13g02065 926 MobiDBLite consensus disorder prediction 900 926 - -
Gma13g02065 926 Pfam Bacterial extracellular solute-binding proteins, family 3 461 794 IPR001638 -
Gma13g02065 926 Gene3D - 455 568 - -
Gma13g02065 926 Pfam Ligand-gated ion channel 795 824 IPR001320 GO:0015276|GO:0016020
Gma13g02065 926 SMART GluR_14 461 795 IPR001320 GO:0015276|GO:0016020
Gma13g02065 926 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 2 923 - -
Gma13g02065 926 Pfam Receptor family ligand binding region 59 394 IPR001828 -
Gma13g02065 926 Gene3D - 51 387 - -
Gma13g02065 926 SUPERFAMILY Periplasmic binding protein-like I 44 407 IPR028082 -
Gma13g02065 926 CDD PBP1_GABAb_receptor_plant 43 412 IPR044440 -
Gma13g02065 926 PANTHER GLUTAMATE RECEPTOR 2 923 - -
Gma13g02065 926 Gene3D - 569 704 - -
Gma13g02065 926 SUPERFAMILY Periplasmic binding protein-like II 442 794 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02065 Gma-Chr13 35796438 35800467 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02065 44 850 Ion Channels AT2G29120 33.018 3.52e-130 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02065 - - gmx:100818078 1755.34