Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02061 ATGGGTTCAGGTGATTGGTTTAAGACAATAATTAGCTTAAGAAAATCAAAACAAGGTAGATCAAAGAAAGCAAAGGGTATCTTAGCTCAAGAGAAACTAAATGCATCAAAGTCAAACAGCTATCCAGGAAAAGAGTCTGGTGGTTTAGCAAATGGTACTAAAAGTGAAAACCTTGTGTCAGCTGGGGTGTCAGTTGAAACTATTGCTGCAACAAGGATCCAGACTGCATTCCGAGCTTATAAGGCTAGAAAAGCTTTACGTCGCATGAAAGGATTTACAAAACTGAAGATCCTAACAGAAGGCTTCTCTGTTAAAAAGCAAGCCAGTACAGCTATAACATACCTTCATTCATGGAGCAAGATACAAGTTGAGATTAGAGCTCGCCGAATCTGTATGGTAACCGAAGACAAGATCAGGAGGAAGAAACTGGAGTCTCAATTAAAACTGGAGGCAAAGCTTCATGATCTGGAGGTTGAATGGTGTGGTGGTTCTGAAACCAAGGAGGAAATCCTTGGAAGGATACATGACAGGGAagaagcagcagttaagcgtgaaagagccatggcatatgccttttcccatcagtggagggccaactctagtcagagccaattgctaggtaattatgaacttagcaaagctaattggggttggagttggaaggaacgctggattgctgctcgtccaTGGGAAAGCCGTGTCCCTAGCTTATCCATCACCCCGAAGAAATCTCAACACAAGCAGCCAAGCCCGAGCAAAGTTCAGAAGGATAAGAACACATCAACACCTAAAACTCCCGTCTCGGTTAAACCTCCTTCAGCCAACGCAAAAGGCACTTCAAAAGCTAGGAGATTGCTCCTGGACTTGGCTCAACGGCTCCGCCTGTACAAACCCCCACCATTCCCTGAAGACATCTTGGATCAGATCATGGAAGAGAAGGGAGATAAGGTTGTCTCAGAAGTGAGTTACACGAAATCAGCCACCCCAATTGCTCAAAACACAGCAAAAATCGGATACAAGAGAGCTGCTGTTTTGATCTGCATCTTTGAAGGGGATGCTGGGGATCTGAGAGTGATACTCACTAAGCGCTCTTCCAAGCTTTCCACTTACTCTGGTCAAGTGGCCTTGCCTGGTGGGAAAGCGGAGGAGGGGGATAAGGATGATGGGGACACTGCAAAAAGAGAGGCAATGGAGGAAATTGGGTTGGATCCTGAACTTGTCGATGTTGTTACTGTTCTTGAACCATTTTTCTCTAAGTACCTCATGAGAGTGGTTCCTGTCATTGGCATTCTTCATGACAAAAAAGCGTTCAAACCTGTTCTGAATCCTGCTGAAGTAGAAGCTGTATTTGATGCACCTTTAGAAATGTTTCTTAAGGATGAAAAAAGGAGTCAAAAGAAGATGCAGTGCATGGGAGAGAATTATCTGATACATTTGTTTGACTATGAAATCGAACATAAAAAATTCCTTATATGGGGTTTGACTGCTGGGATCTTGATAAGGGCTGCATCAGTTGTGTACCAACGACCTCCAGCCTTCATGGAGCAGAATCCTAAATTCAAGCTTCCTCGGGATTTAACTATTAGAGATATAAGGGGAGGAGAAGTGAGAAACGTGAAGTGGTGCAACAAGGGAATGGGTTCGAACAGTACGGAGACAGGAGGTATTCATAATTCGCCCTCTTCCTCTAATGATCTCATCACCAAATCAAAACTCACCGTTTCGAAGAAGAATAAGAGAGCAGCAGTTCTGATCTGCGTCTTCGAAGGCGGCGATGGGAATCTGCGAGTATTTCTCACCCAGCGGGCTTCCTCTCTCTCAACCCACTCCGGTGAGGTTTCTTTGCCAGGTGGCAAGAGAGAAGAAGGTGATGCTGACGATGTGCAAACTGCGCTGAGAGAGGCTAAGGAGGAAATTGGCTTGGACccttctcttgtttctTATGGTGTTACAATAATACCCGTGGTAGGAGTACTGTCCGACAAAGATGCATTTTCTCCAATTTTAAATTCAACTGAAGTTGAAGCAATATTTGATGTTCCATTGGAGATGTTCCTCAAGAACGATAACAGAAGAGCCGAGGAAAGAGAATGGATGGGGGAGAAACATCTTGTACATTATTTTGATTATGAGGATGGGAATAACAAGTATGTGATATGGGCTATAACTGCTGCAATCTTGATTAGGGCGGCTACTCTTTTACTTCAGCGACCACCTGCTTTTCTAGAGCAGAGACCTAAAATATGGGGAGGAATGACTGAAAATGGCATATGA 2274 0.4059 MGSGDWFKTIISLRKSKQGRSKKAKGILAQEKLNASKSNSYPGKESGGLANGTKSENLVSAGVSVETIAATRIQTAFRAYKARKALRRMKGFTKLKILTEGFSVKKQASTAITYLHSWSKIQVEIRARRICMVTEDKIRRKKLESQLKLEAKLHDLEVEWCGGSETKEEILGRIHDREEAAVKRERAMAYAFSHQWRANSSQSQLLGNYELSKANWGWSWKERWIAARPWESRVPSLSITPKKSQHKQPSPSKVQKDKNTSTPKTPVSVKPPSANAKGTSKARRLLLDLAQRLRLYKPPPFPEDILDQIMEEKGDKVVSEVSYTKSATPIAQNTAKIGYKRAAVLICIFEGDAGDLRVILTKRSSKLSTYSGQVALPGGKAEEGDKDDGDTAKREAMEEIGLDPELVDVVTVLEPFFSKYLMRVVPVIGILHDKKAFKPVLNPAEVEAVFDAPLEMFLKDEKRSQKKMQCMGENYLIHLFDYEIEHKKFLIWGLTAGILIRAASVVYQRPPAFMEQNPKFKLPRDLTIRDIRGGEVRNVKWCNKGMGSNSTETGGIHNSPSSSNDLITKSKLTVSKKNKRAAVLICVFEGGDGNLRVFLTQRASSLSTHSGEVSLPGGKREEGDADDVQTALREAKEEIGLDPSLVSYGVTIIPVVGVLSDKDAFSPILNSTEVEAIFDVPLEMFLKNDNRRAEEREWMGEKHLVHYFDYEDGNNKYVIWAITAAILIRAATLLLQRPPAFLEQRPKIWGGMTENGI 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02061 757 Pfam NUDIX domain 579 704 IPR000086 -
Gma13g02061 757 Pfam NUDIX domain 340 455 IPR000086 -
Gma13g02061 757 CDD CoAse 340 500 IPR045121 GO:0010945
Gma13g02061 757 ProSiteProfiles Nudix hydrolase domain profile. 578 723 IPR000086 -
Gma13g02061 757 ProSiteProfiles IQ motif profile. 66 94 IPR000048 GO:0005515
Gma13g02061 757 MobiDBLite consensus disorder prediction 238 281 - -
Gma13g02061 757 PANTHER NUDIX HYDROLASE 337 519 IPR045121 GO:0010945
Gma13g02061 757 PANTHER NUDIX HYDROLASE 274 335 IPR045121 GO:0010945
Gma13g02061 757 SUPERFAMILY Nudix 339 499 IPR015797 -
Gma13g02061 757 PANTHER NUDIX HYDROLASE-LIKE PROTEIN 337 519 - -
Gma13g02061 757 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 557 732 - -
Gma13g02061 757 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 310 504 - -
Gma13g02061 757 SUPERFAMILY Nudix 576 727 IPR015797 -
Gma13g02061 757 PANTHER NUDIX HYDROLASE 564 756 IPR045121 GO:0010945
Gma13g02061 757 PANTHER NUDIX HYDROLASE-LIKE PROTEIN 564 756 - -
Gma13g02061 757 PANTHER NUDIX HYDROLASE-LIKE PROTEIN 274 335 - -
Gma13g02061 757 MobiDBLite consensus disorder prediction 238 275 - -
Gma13g02061 757 CDD CoAse 579 728 IPR045121 GO:0010945
Gma13g02061 757 ProSiteProfiles Nudix hydrolase domain profile. 339 474 IPR000086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02061 Gma-Chr13 35759576 35769560 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02061 1 285 IQD Protein Family AT2G33990 53.287 4.22e-84 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02061 - - gmx:100786185 555.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00760 15 6228925 6232589 Gma13g02061 13 35759576 35769560 GST