Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02040 ATGTGCCCTGTGCTCCCCCTGTACTTTAAAGTTCACGGAGCTCTTCAAATAGTTTCATTGATTCGTTTTCTCTCCCTTCTCCCTCTGGTCTCTCTCTGTCTCCAAAGTCAGAAACAGAAACTAAAATTGTATAAGAACCAAACCCCAAACACTCACTTTTCCAAAATTTCAATATCTTGCTTTGTTTTCTCCTTCCTCTCAAGCATGTCTACTCCTTCATCATCATCATCTTCTTCTTCTATTTGGGTGTTGTCTAACATAAAACTTCAGTTCTTTGGCCGCATCAGAAGGTTTCTCCAATCCAAAGCAACCAAAAAGCGTTATGACCCCTCTGATCGGTTTGACACAGCTAAGAGCAAAGTTGAACACAACAACAAGGTTGAAAATCTTGAAACAGTTCAAGTTATGGAGAAGCATAAAGAGGAGGAGGAAGAGTCTGTGATCATGTTGCAGAGAACTGTGAAGATGCTTCACTTTGGAAGCTGGGAAGAGAAGGAGGTGGCAGCAAAGGAGATTGAAAAGTTAGCCAAGGAAGATGTTAAGGTTAGAAAATTGATAACAGAACTTGGGGTGGTGCCGGTGTTGGTATCTATGGTGGCGTCGCCGGTGGCTAGCCGCCGGCGAGCAGGGTTGACGGCGTTGATCCACCTAGCTGATGGAACCTACACGAACAAGGCTTTGATAGTGGAGGCAGGAATATTGTCCAAGCTTCCTAAGACAATTGACCTTGTAGATGAATCAACAACAAGTAAATTGGTAGAGTTGCTTTTGTCATTGTCATCTCTAGCAAACACTCAATTCCCTCTTGCCATATTAGACTTTCTACCGTTACTTAGAAACATTCTTGAGAAAGGCTCAAGTTTTGACACCAAAAATTCATGTTTAGGTGCCTTACATAACCTATCAACTGTGTTAGAGAATGCATGCCCTTTGGTTTCAAGTGGGGTGGTCCCTATCCTCTTGGAAGTATCCTCAATAAAAGAAATTTCAGAGAAAGCACTTGCCACTCTAGGGAACTTATCAGTGACTTTGATGGGAAAGAAAACAATAGAGAACAATTCAATGGTGCCAGAAACCTTTATTGAGATCTTGTCATGGGAAGACAAACCCAAATGCCAAGAGTTGTCAGTGTATATTTTGATGATTCTTGCACATCAAAGCTCATTGCAAAGAAAGAAAATGGCACAGGCAGGAATTGTTCCGGTGCTTCTTGAAGTGGTTTTATTGGGGAGTAATTTGGCTCAGAAGAGAGCAATGAAACTATTGCAATGGTTTAAGGATGAAAGGCAAACGAAAATGGGTCCACATTCTGGTCCACAAACACCAAGATTTGCAATGGGGTCACCTGTGAATCAAAGAGAAGCAAAAGAAGGGAAGAGATTGATGAAGAGTTTGGTGAAACAAAGTTTAAATAGGAATATGGAAATAATAACGCAGAGGGCAAATGCAGCAGGGGAGTCTTCTAAATTGAAGTCTTTGATTATTAGCACTAGTTCCAAGAGTTTGCCTTACTAA 1515 0.4132 MCPVLPLYFKVHGALQIVSLIRFLSLLPLVSLCLQSQKQKLKLYKNQTPNTHFSKISISCFVFSFLSSMSTPSSSSSSSSIWVLSNIKLQFFGRIRRFLQSKATKKRYDPSDRFDTAKSKVEHNNKVENLETVQVMEKHKEEEEESVIMLQRTVKMLHFGSWEEKEVAAKEIEKLAKEDVKVRKLITELGVVPVLVSMVASPVASRRRAGLTALIHLADGTYTNKALIVEAGILSKLPKTIDLVDESTTSKLVELLLSLSSLANTQFPLAILDFLPLLRNILEKGSSFDTKNSCLGALHNLSTVLENACPLVSSGVVPILLEVSSIKEISEKALATLGNLSVTLMGKKTIENNSMVPETFIEILSWEDKPKCQELSVYILMILAHQSSLQRKKMAQAGIVPVLLEVVLLGSNLAQKRAMKLLQWFKDERQTKMGPHSGPQTPRFAMGSPVNQREAKEGKRLMKSLVKQSLNRNMEIITQRANAAGESSKLKSLIISTSSKSLPY 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02040 504 Gene3D - 121 487 IPR011989 -
Gma13g02040 504 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 139 504 - -
Gma13g02040 504 SMART arm_5 179 219 IPR000225 GO:0005515
Gma13g02040 504 SMART arm_5 264 303 IPR000225 GO:0005515
Gma13g02040 504 SMART arm_5 304 342 IPR000225 GO:0005515
Gma13g02040 504 SMART arm_5 221 261 IPR000225 GO:0005515
Gma13g02040 504 MobiDBLite consensus disorder prediction 431 457 - -
Gma13g02040 504 SUPERFAMILY ARM repeat 154 423 IPR016024 -
Gma13g02040 504 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 139 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02040 Gma-Chr13 35632716 35635967 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02040 149 442 U-box Gene Family AT1G67530 28.525 2.89e-17 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02040 - - gmx:100813828 856.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00774 15 6339116 6342380 Gma13g02040 13 35632716 35635967 GST