Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02022 ATGGAAATGAGATGGAACACATTTGGATTTTGTCTAAGAATTTATATTTGCTTGATCTTTCTGTGGGGAAATCAAGAATGTTGGTCCATTAATAATGAAGGATTGGCTTTGTTAGCGTTTCGAGCAAGAATAACTAATGATCCCTTCAATGCTTTGGTGAATTGGAATCCTAATGATTGTGACCCTTGCAAGTGGTTGGGCGTGCATTGTGTAGATGGTAAAGTGCAAATGATGGAGTTAAAAGGGTTATCTTTGGAAGGGACATTGGCTCCTGAACTGGGAAAACTAAGTTACCTAAATTCTCTTGTGTTATGCAAGAATAACTTTTTTGGTGTCATTCCCAAAGAACTTGGAGATTTACCCAAGCTAGAGTTATTGGATTTAGGGGAGAATAACTTGTCAGGAAACATCCCAATAGAAATTGGCAAGATGTCATTACTAAAACACTTATTGAAGCTAAGAAAGTCTGCATTTCATGGCCATGAAAATAATTATTGTGACCTTTTGCCTAGTTCTAATGTGCCAGAGATTGCTCATAATGTACCAAAACATGTTAATTATGCACGTCGTATGTTACTTCAATCCAGTGATAATAACTTTGCTGCACCTTTTAATGGTGAATCAACTATAGAGATTAGCTTTGTTCCAATTACCTTTAGTAGTGGAGCTTTCTCAGCTATTTCAAATGCTAATAAGAAACAAAATCAAACACCTACACCCTCGCACTCACCTTTTGATTCTCCACACGATGTTTCCAATGAAAATCAAACAAGTCGACAAGATGCAACTAATGGCGCTTCTAGAAATTTATGGAAGTATATAATTAGTGTTGTTGTTGTGTTAATCATTATTATCATAATTATTTTATACACTTCGAGAAAACAAGCTGCAAAAGTAATAGGCCCTTGGAAGACAGGAATAAGTGGACAATTGCAAAAGGCATTTATAACAGGGGTTCCTAAGTTGAATCGAGCAGAATTAGAGATAGCTTGTGAAGATTTTAGCAATATTGTTAATCTTTATTATGAAGGGTGCACCATATATAAAGGAACATTATCCAATGGAGTTGAGATTGCTGTGGTTTCTACTTTGATTACTTCTCCCCAAGATTGGTCAAAGGACATGGAGATAAAATACCATAAAAAGATTGATATTTTGTCTCGCATAAATCATAAGAACTTTGTTAATCTTATTGGTTACTGTGAGGAAGAAGAGCCATTCACTAGGATGTTGGTGTTTGAGTATGCTCCAAACGGAAATGTTTTTGAGCATTTGCATGTTGAGGAAATGGAACGTCTTGATTGGAGTGAAAGGGTTAGAATTATCATGGGCATTGCATATTGTCTTCAATACCTGCACCATGATTTGAGTCCACCAATGATTCATAGCAGCCTTGCTTCAAATATGATATTTTTAACAGATGATTTTGCTGCGAAGATGGCAGTAGTTACTTTTAGAGATATTGTATCGCCAACTGAGACGATAGGTGATTCAAAGAAACCTCAAGTGTCATCCCAGGGTAATCTTGAAAGTAATGTCTTTGACTTTGGGAAGTTATTGCTTGAAATTATCTCAGGGAAATTGCCTTACTTTGAAGAACAAGGAACCCTAGTGAATTGGGTTGGTAATTACTTTAATGACAAGTGCAACATAAACTACTTGATTGATCCCACCCTTAAATCTTTCAAGGAAAATGAACTTAATCTCATTTGTGAAGTGATCCAAGATTGTATCCATCTCGATCCAAAGTTAAGACCAACAATGAGGGACGTGACTTCCAAATTAAAGGAAGCACTTGGTGTGTCACCTGAGCAAGCATTCCCAAGACTTTCTCCACTCTGGTGGGCTGAATTTGAGATCTTATCAGTGGAGGCGACTTAA 1881 0.3663 MEMRWNTFGFCLRIYICLIFLWGNQECWSINNEGLALLAFRARITNDPFNALVNWNPNDCDPCKWLGVHCVDGKVQMMELKGLSLEGTLAPELGKLSYLNSLVLCKNNFFGVIPKELGDLPKLELLDLGENNLSGNIPIEIGKMSLLKHLLKLRKSAFHGHENNYCDLLPSSNVPEIAHNVPKHVNYARRMLLQSSDNNFAAPFNGESTIEISFVPITFSSGAFSAISNANKKQNQTPTPSHSPFDSPHDVSNENQTSRQDATNGASRNLWKYIISVVVVLIIIIIIILYTSRKQAAKVIGPWKTGISGQLQKAFITGVPKLNRAELEIACEDFSNIVNLYYEGCTIYKGTLSNGVEIAVVSTLITSPQDWSKDMEIKYHKKIDILSRINHKNFVNLIGYCEEEEPFTRMLVFEYAPNGNVFEHLHVEEMERLDWSERVRIIMGIAYCLQYLHHDLSPPMIHSSLASNMIFLTDDFAAKMAVVTFRDIVSPTETIGDSKKPQVSSQGNLESNVFDFGKLLLEIISGKLPYFEEQGTLVNWVGNYFNDKCNINYLIDPTLKSFKENELNLICEVIQDCIHLDPKLRPTMRDVTSKLKEALGVSPEQAFPRLSPLWWAEFEILSVEAT 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02022 626 PANTHER LRR RECEPTOR-LIKE KINASE 156 626 - -
Gma13g02022 626 Pfam Protein tyrosine and serine/threonine kinase 347 595 IPR001245 GO:0004672|GO:0006468
Gma13g02022 626 Gene3D Transferase(Phosphotransferase) domain 1 416 605 - -
Gma13g02022 626 ProSiteProfiles Protein kinase domain profile. 323 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g02022 626 MobiDBLite consensus disorder prediction 231 262 - -
Gma13g02022 626 PANTHER PROTEIN MALE DISCOVERER 2 156 626 - -
Gma13g02022 626 PANTHER PROTEIN MALE DISCOVERER 2 1 153 - -
Gma13g02022 626 SUPERFAMILY Protein kinase-like (PK-like) 346 595 IPR011009 -
Gma13g02022 626 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Gma13g02022 626 Gene3D Phosphorylase Kinase; domain 1 305 415 - -
Gma13g02022 626 SUPERFAMILY L domain-like 30 151 - -
Gma13g02022 626 PANTHER LRR RECEPTOR-LIKE KINASE 1 153 - -
Gma13g02022 626 Gene3D Ribonuclease Inhibitor 29 211 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02022 Gma-Chr13 35483846 35489825 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02022 1 596 Receptor kinase-like Gene Family AT5G16000 27.404 3.07e-44 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Gma13g02022 PK_Tyr_Ser-Thr 1.2e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02022 - - gmx:100808994 1234.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00791 15 6494391 6499658 Gma13g02022 13 35483846 35489825 GST