Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02018 ATGACGCCGTTCTTCCTACTTCACTACCACTATAACCGCGAACTATCCCACTTCACCAACAACTATATCCCACCCTCTGTCCCTTTTTTTTCTCTCTTCGCTTTCTTTCTTTCAATTCATACTCACCATTGGGGTATAATAGGGACACGACATTGTAACGGTGGAGTTAAGAAAATGAAGCCCTGCTGCACATTCTTCATTCTCCTTTCGCTAGTTGTTATTCTCGTTGAATCTTCATGCAAAAACGAAGACCATGAGCTGGTGTCAAAGGCGTTCCAATCTGTGTCTGGATTCAACTCTTCCTGGTTCGAAACAGGTTCTAATTGTTCAAATGCTGTGATTAAAGGGATAAATCTTTCGTCCAAAAACCTAAGTGGGAACATCTCCTGGAAGTATCTGAGGAACATGTCCAAGTTGGAGGTTCTAGATCTGTCTGGGAATTTTCTGCAAGGCCAAGTCCCAAATTGGTTCTGGAGAAGCTCAACCTTATTGGTAGTGAACCTTTCCAGCAACAGGTTCGGAGGGAGCATTCACCCGGCCACTTCCCAAAACAGTTCCTTTTCATCGCTGCAAAATCTCAATCTCTCACACAACAGGTTCACCAACCAGCTTCACCTCTCTGGTTTCTCAAATCTTAAAAGCCTCGACCTTTCGCACAACAACCTCGGAACCTTGCCTTCCGGGTTCCAAAACCTCACTACCAATCTACACCACCTCGATCTCTCCAACTGCAACATCAAAGGAAACGTAAAACCCATCTCCTCCCTCACCAAACTTTCATCCTTGGATTTATCAAACAACACGTTGAACGGTAGTTTCCCCTCTGACTTCCCTCCTCTGAACAACATCAAATTCTTGAACATCTCCCACAACAACTTCAAAGCCTCCACCACCTTAGACAGGTTCATAAAGTTCGGCAAATCAGCGTTCATTCACGCCGGCAACAACTTCAACTACTACAACGCATCAAAAACGCCAAAGCTTCGTTCAACTCCAACTCCAACCCCACCGCACCAACAGCCCCACCACATTCACGCGAAGAAGAAGAAGCGGCCAAAAGAAAAACAAAAGTCAAAACACAAAACCAGAACCATGATGATTGTGGCCTCGGCACTTGTTGTCGTTGTCGCGTTGTGCATGTGCTGGGTGTGGTGTTGCAGGAGGAAGAGGCAATTGGCGAAAAGGAGCAAGTGGGCGATCTCGAAGCCGGTCCCACTGAGCATGAAGATGATGGAAAAATCAGGACCGTTCGCGTTCGAGACCGAGTCAGGGACATCATGGGTTGCTGACCTCAAAGAACCCTCTTCCGCAGCCGTGGTCGTGTTCGAGAAGCCACTCATGAAACTCACCTTCGTCGACCTTCTCGCTGCCACGTCACACTTCGGAAAAGACTCTCTCCTCGCTCAGGGCAGGTGTGGGCCCGTTTATCGCGCTGTCTTACCCGGAGACATCCACGTGGCAATCAAGGTCCTCGAAAACGCCAGAGACGTCCATCATCATGACGCTGTCGCTCTCTTCGTTGACATTTCCCAACTCAAACACCCCAATCTCTTGCCCCTCTCCGGTTACTGTATTGCAGGTAAGGAGAAGCTGGTGTTGTATGAGTTTATGTCGAACGGGGATTTAGGTAGGTGGTTGCAGGAGCTACCAACAGGGGAGACTAACGTGGAGGATTGGAGTGGTGACACGTGGGACATTATTCATAACGGCGCCGTTTCTCGAGCCTCACCCCCCGAAAAAATGGGGTGGTTAATACGGCACCGTATTGCGGTGGGTGTGGCGCGTGGATTAGCGTTTCTCCACCACGCGGGGTCGAGGCCCGTCGTGCACGGCCACCTGGTGACGTCGAACGTGCTTCTCGGCGACGACTTCGAGCCGCGGATCGCGGATTTCGGGTTTCGGAAACTCGGGCGAGAGAGCGCGGCGGCGAATTGTTCCACCGAGACGGACGTTTACTGTTTCGGGGTGGTGCTGATGGAGCTTCTGACGGGGAAGGCCGGCACGGCGGAGACGGTGGTTTGGGTGAGGAAGGCGGTGAGGGAGGGCCACGCGGTGAGGACGTTGGATGAGAGGCTTAAACTCGGCGGCGACTCGGAGAGTGAGATGGTGGAGAGTCTCCGAGTCGCCTATTTGTGTACGGCCGAGTCTCCGGGGAAGAGGCCCACCATGCAGCAAGTGTTGGGCCTTCTCAAAGATATTCACCCGAGTCATGGACTCGACTGA 2223 0.5133 MTPFFLLHYHYNRELSHFTNNYIPPSVPFFSLFAFFLSIHTHHWGIIGTRHCNGGVKKMKPCCTFFILLSLVVILVESSCKNEDHELVSKAFQSVSGFNSSWFETGSNCSNAVIKGINLSSKNLSGNISWKYLRNMSKLEVLDLSGNFLQGQVPNWFWRSSTLLVVNLSSNRFGGSIHPATSQNSSFSSLQNLNLSHNRFTNQLHLSGFSNLKSLDLSHNNLGTLPSGFQNLTTNLHHLDLSNCNIKGNVKPISSLTKLSSLDLSNNTLNGSFPSDFPPLNNIKFLNISHNNFKASTTLDRFIKFGKSAFIHAGNNFNYYNASKTPKLRSTPTPTPPHQQPHHIHAKKKKRPKEKQKSKHKTRTMMIVASALVVVVALCMCWVWCCRRKRQLAKRSKWAISKPVPLSMKMMEKSGPFAFETESGTSWVADLKEPSSAAVVVFEKPLMKLTFVDLLAATSHFGKDSLLAQGRCGPVYRAVLPGDIHVAIKVLENARDVHHHDAVALFVDISQLKHPNLLPLSGYCIAGKEKLVLYEFMSNGDLGRWLQELPTGETNVEDWSGDTWDIIHNGAVSRASPPEKMGWLIRHRIAVGVARGLAFLHHAGSRPVVHGHLVTSNVLLGDDFEPRIADFGFRKLGRESAAANCSTETDVYCFGVVLMELLTGKAGTAETVVWVRKAVREGHAVRTLDERLKLGGDSESEMVESLRVAYLCTAESPGKRPTMQQVLGLLKDIHPSHGLD 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02018 740 Pfam Protein tyrosine and serine/threonine kinase 465 636 IPR001245 GO:0004672|GO:0006468
Gma13g02018 740 Gene3D Ribonuclease Inhibitor 83 181 IPR032675 -
Gma13g02018 740 Gene3D Ribonuclease Inhibitor 182 312 IPR032675 -
Gma13g02018 740 Gene3D Phosphorylase Kinase; domain 1 421 536 - -
Gma13g02018 740 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 62 740 - -
Gma13g02018 740 PRINTS Leucine-rich repeat signature 212 225 - -
Gma13g02018 740 PRINTS Leucine-rich repeat signature 256 269 - -
Gma13g02018 740 SUPERFAMILY Protein kinase-like (PK-like) 440 730 IPR011009 -
Gma13g02018 740 MobiDBLite consensus disorder prediction 328 361 - -
Gma13g02018 740 ProSiteProfiles Protein kinase domain profile. 461 737 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g02018 740 Gene3D Transferase(Phosphotransferase) domain 1 561 738 - -
Gma13g02018 740 SUPERFAMILY L domain-like 109 296 - -
Gma13g02018 740 MobiDBLite consensus disorder prediction 341 361 - -
Gma13g02018 740 ProSiteProfiles Leucine-rich repeat profile. 211 233 IPR001611 GO:0005515
Gma13g02018 740 PANTHER KINASE, PUTATIVE-RELATED 62 740 - -
Gma13g02018 740 Pfam Leucine Rich Repeat 211 232 IPR001611 GO:0005515
Gma13g02018 740 Pfam Leucine Rich Repeat 138 157 IPR001611 GO:0005515
Gma13g02018 740 SMART LRR_typ_2 136 159 IPR003591 -
Gma13g02018 740 SMART LRR_typ_2 256 279 IPR003591 -
Gma13g02018 740 SMART LRR_typ_2 209 231 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02018 Gma-Chr13 35446930 35449723 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02018 113 733 Receptor kinase-like Gene Family AT5G07280 30.317 5.11e-74 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Gma13g02018 PK_Tyr_Ser-Thr 1.1e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02018 - - gmx:100807390 1426.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00795 15 6538636 6541542 Gma13g02018 13 35446930 35449723 GST
Gma05g01594 05 37703855 37706930 Gma13g02018 13 35446930 35449723 PCT
Gma08g01077 08 9145360 9148459 Gma13g02018 13 35446930 35449723 PCT
Gma13g02018 13 35446930 35449723 Gma05g01594 05 37703855 37706930 PCT
Gma13g02018 13 35446930 35449723 Gma08g01077 08 9145360 9148459 PCT