Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02015 ATGGAAGATGTCAAAGTTGTTGCTTGGCTCATTTCACTTTTTCTGTGGAATTGGGTGCTTGTTGTTGATGGCACTGATAGCCTTCTCTCTCCAAAGGGTGTCAACTATGAAGTGGCCGCTTTGATGTCCATGAAGAGTAAAATGAATGATGAGTTGCATGTCATGGATGGTTGGGATATTAATTCGGTTGATCCTTGTACTTGGAACATGGTTGGTTGCTCTGCCGAAGGTTATGTTATTTCCCTGGAAATGGCCAGTGCGGGTTTATCTGGAACGATTTCCTCAGGAATTGGAAATTTGAGCCATCTCAAAACATTGTTATTGCAGAACAATCAGTTATCTGGTCCTATCCCGACTGAGATAGGGAGGTTGTTAGAGCTTCAAACCCTTGACCTTTCTGGTAACCAGCTTGATGGAGAAATTCCTAATTCTTTGGGCTTTTTGACTCATCTTAGTTACTTGCGGCTCAGCAAAAATAAACTATCTGGACAGATTCCTCAGCTTGTTGCTAATCTCACAGGCCTTTCATTCTTGGATTTGTCATTCAATAATCTCAGTGGTCCCACTCCAAAAATTTTAGCAAAAGGTTATAGTATTTCAGGAAACAATTTCCTCTGCACCTCTTCCTCACAAATTTGTATGGGCTTTTCAAAACCAGTAAATGATACAGGGTCATCTCAGACGAGTGGCAGTCATCACCAAAGGGTGCTTGCTGTTGTTATTGGCTTTAGTTGCGCATTTGTAATTTCATTGGTGCTTCTTGTCTTTTGGTTGCATTGGTACAGATCACACATCCTCTACACATCTTATGTGGAGCAAGATTGTGAATTTGATATTGGCCATTTGAAGAGGTTCTCCTTCCGGGAATtgcaaattgctactggaaatttcaattcaaaaaatatcctaggacaaggtggttttggtgttgtctacaaagGATGCCTTGCAAACAAAATGTTGGTGGCAGTAAAGAGGCTGAAAGATCCCAATTACACTGGAGAAGTGCAGTTTCAAACGGAAGTTGAGATGATTGGCTTGGCTGTGCATCGGAACCTCTTGCGTCTTTATGGATTCTGTATGACACCAGATGAAAGGTTACTTGTTTATCCTTACATGCCCAACGGCAGTGTTGCTGATCGCTTGAGAGAGACTTGCCGTGAAAGGCCATCGTTGGACTGGAACAGGAGGATGCATGttgctcttggggctgcgcgtgggctcctatatttgcatgaacaatgcaatccaaaaataatccacagggatgttaaggctgcaaacattttgttagatgaaagttttgaagctgtggtgggggattttggtcttgctaagctcttagatcaaagggattcacatgtaactactgcagtgcggggtactgtaggtcacattgccccagaatatctctcaactggacagtcttctgaaaaaacagatgtttttggatttggcatattacttttggagctcataacaggacacagggcactgGATGCTGGAAATGCTCAGGTCCAAAAGGGAATGATCCTTGATTGGGTTAGAACCTTATTTGAGGAGAAGCGGCTGGAAGTGCTAGTCGATAGGGATCTTAGGGGATGTTTTGATCCAGTAGAGTTAGAGAAAGCAGTGGAGTTGTCTTTACAATGTGCTCAGTCGCTTCCCACTTTGCGGCCAAAGATGTCAGAAGCTTTAAAGATTCTAGAAGGTCTGGTAGGGCAGTCAGTGAGGCCAGAGGAGTCACAAGGGGGAACTAACCTATATGATGAAAGAACTTGCAGTTTCTCACAAAATTATAGTGATGTTCATGAAGAACCTTCCTTTATTATTGAAGCCATTGAGCTTTCTGGACCTCGGTGA 1863 0.3446 MEDVKVVAWLISLFLWNWVLVVDGTDSLLSPKGVNYEVAALMSMKSKMNDELHVMDGWDINSVDPCTWNMVGCSAEGYVISLEMASAGLSGTISSGIGNLSHLKTLLLQNNQLSGPIPTEIGRLLELQTLDLSGNQLDGEIPNSLGFLTHLSYLRLSKNKLSGQIPQLVANLTGLSFLDLSFNNLSGPTPKILAKGYSISGNNFLCTSSSQICMGFSKPVNDTGSSQTSGSHHQRVLAVVIGFSCAFVISLVLLVFWLHWYRSHILYTSYVEQDCEFDIGHLKRFSFRELQIATGNFNSKNILGQGGFGVVYKGCLANKMLVAVKRLKDPNYTGEVQFQTEVEMIGLAVHRNLLRLYGFCMTPDERLLVYPYMPNGSVADRLRETCRERPSLDWNRRMHVALGAARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDQRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGHRALDAGNAQVQKGMILDWVRTLFEEKRLEVLVDRDLRGCFDPVELEKAVELSLQCAQSLPTLRPKMSEALKILEGLVGQSVRPEESQGGTNLYDERTCSFSQNYSDVHEEPSFIIEAIELSGPR 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02015 620 ProSiteProfiles Protein kinase domain profile. 297 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g02015 620 ProSitePatterns Serine/Threonine protein kinases active-site signature. 419 431 IPR008271 GO:0004672|GO:0006468
Gma13g02015 620 Gene3D Transferase(Phosphotransferase) domain 1 373 578 - -
Gma13g02015 620 Pfam Leucine rich repeat N-terminal domain 35 74 IPR013210 -
Gma13g02015 620 Pfam Protein kinase domain 298 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g02015 620 SUPERFAMILY Protein kinase-like (PK-like) 281 582 IPR011009 -
Gma13g02015 620 Gene3D Ribonuclease Inhibitor 34 214 IPR032675 -
Gma13g02015 620 SUPERFAMILY L domain-like 36 206 - -
Gma13g02015 620 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 8 620 - -
Gma13g02015 620 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 8 620 - -
Gma13g02015 620 Gene3D Phosphorylase Kinase; domain 1 267 372 - -
Gma13g02015 620 ProSiteProfiles Leucine-rich repeat profile. 126 149 IPR001611 GO:0005515
Gma13g02015 620 ProSitePatterns Protein kinases ATP-binding region signature. 303 325 IPR017441 GO:0005524
Gma13g02015 620 SMART serkin_6 297 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g02015 620 PRINTS Leucine-rich repeat signature 127 140 - -
Gma13g02015 620 PRINTS Leucine-rich repeat signature 172 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02015 Gma-Chr13 35421494 35425357 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02015 42 620 Receptor kinase-like Gene Family AT5G45780 72.117 0.0 832
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Gma13g02015 Pkinase 9.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02015 - - gmx:100810610 1234.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00799 15 6563786 6567941 Gma13g02015 13 35421494 35425357 GST