Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02004 ATGATAAAGACATATCCTTGGACTTTGAAAATAATTGATAAGGAGAGAATCAGGATTATAAACCGGGAACATGAAACTTCCAGTGGAATTGTGCTGGCATATGCTCCTCCTACTCTTTTCTATGGCATATCCAAAATTTGGTGCGATTATTACTTGCTATATATAGGACTTCTATATTATAACATGATAGCCTTAGACAGAATTAGTGCCAAAAACATAAATCAACGAGCACTAAAACGAAGCAAATTTAATATCTTACAAGAATCAAAATTGAAAAAAAGATGGTCCTTGATTGTTGGGAGACTTCCAGGAAGAACTCCAAATGATGTGAAAAACTACTGGAACACCTACATTCGAAGGAAGGTATCATCATCTCACAAGGTGGTGATCAATGAAAAGCAAGAGAAAACAACAGTGAAGCCTCATGTGGTGATAAAGCCTAAGGCTCGAACTTTCTCAAGACCTTCACCCTCCGGGTTGAGAGGGAGTAATGTTCTTAGAGAAGAAGGTGGTGAGAGTGGGGCCAAACACTGCTCAACTCATCATCAAGCATGTGCAGCTTCATCAGAGTGCATTAATAATTGGAGTACTGATCAGTGGTGGAAAACTATGATGCACGACAAGGGGGACAACTTAGACAACAACCAATGCTTGTTGGCCTACCAGGATGAGGTTGGGAAGCTAAAATTCATAATCCTCTTAAGTTAA 708 0.3927 MIKTYPWTLKIIDKERIRIINREHETSSGIVLAYAPPTLFYGISKIWCDYYLLYIGLLYYNMIALDRISAKNINQRALKRSKFNILQESKLKKRWSLIVGRLPGRTPNDVKNYWNTYIRRKVSSSHKVVINEKQEKTTVKPHVVIKPKARTFSRPSPSGLRGSNVLREEGGESGAKHCSTHHQACAASSECINNWSTDQWWKTMMHDKGDNLDNNQCLLAYQDEVGKLKFIILLS 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02004 235 ProSiteProfiles Myb-like domain profile. 94 118 IPR001005 -
Gma13g02004 235 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 27 123 - -
Gma13g02004 235 PANTHER MYB TRANSCRIPTION FACTOR 27 123 - -
Gma13g02004 235 Gene3D - 68 144 - -
Gma13g02004 235 CDD SANT 92 118 IPR001005 -
Gma13g02004 235 Pfam Myb-like DNA-binding domain 90 117 IPR001005 -
Gma13g02004 235 SUPERFAMILY Homeodomain-like 91 123 IPR009057 -
Gma13g02004 235 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 89 122 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02004 Gma-Chr13 35327416 35330831 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02004 94 153 MYB Transcription Factor Family AT1G56650 45.312 1.05e-10 58.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gma13g02004 Myb_DNA-binding 3.8e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02004 - K16166 gmx:100802612 301.982