Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01996 ATGATGAAGTGGGGAGGAAGAAAACACTCTTCAGCTTCTTCTTCTTCTTCTAGCTCTTCTTTCATTTCTCATGCATCTCCTTTCTCTTGGTTGTCAAAGTTCAAGCACATGAGAATCAATTCAGAAAGTGCTGGAAAAACGAAGCACAAGGCAAAGCAGAGTGGTTCACCACAGTATTCTTGTGAGTATGGAGAAGATAAATATTGTGTAAAGGATGATGATGGTGCTTTCTGTAGACAATTACCATTTAATGAAGAGAGTTATGAGGATAAGAAGAATAAAGATATTGATGATAATGTTAAAGTCATTTCCTGCTCAACCACAAGTTGCCTTGGTGTTAGAAGGGATGCTAAGAAACATGGAAAGAGAGAAGGCACACTCAAGTTAAAGGAGAAGGATAATATTGGTCTTGGAGAAGAAAGAAAGTTGCTGAATGATGGGAAGGTTTCAAAGGAGATGGATGAGTACAATAGAGAAAAGGAATATGAAAACTTAAGGAGAAGATTTGAGAGGAAAGCACAAAAGGCTTTTCAAGAGCAACTCTTGACATTAGGAAGAGAAGTGGAGGAAGTTGAGTTTGGATCCAGTAAAACAGTGGAAAAAGAAGATGTGTTGCAATATGAATCACCTAGAACAATTTGCACCCCAAGAACACATGCTTTTTCCACTTCATCAGTTTCAAAGAATCCTATCCTTGGAAATATTACAGAAGAGATTGAGAAAACTGAGAGGCTGTCTCCCAAGAAAATGAGTTCTGAGAGGCAGAACTTGAAACAATCTGAGGAGTTGAAGAGGCAGAAGCAACCACATCATCTTCCTCCCAGCAGAGAACTTCAAAGGAGGAAACAAAAGCCAAGCTCTAGGGTCAAAATACATTCTCCAAGGATGGTTTCCAAGGTTGAAATCTGCAAAATAAAGGCTCTAGAAGACATGAAGAAAGCAAAACTAAAGACAAAGAAAAAAAGGGAGGAAACTGTGGAGGAAACACCAGGATTAGAGAGCTTTGCTGTGATCAAGTCCTCATTGGATCCAAAGCAAGATTTCAGAGATTCAATGATTGAGATGATCATTGAGAATCAGATTAGCAAGCCAGAAGAAATGGAAGATCTGTTGGCATGTTATCTGACTTTGAATGCAGATGAGTATCATGATCTCATCATCAAAGTGTTCCGGCAGGTATGGTCTGACATGACCCGAGGTGGTTTGGGTATTAAACTAAACTTGCAATGGAGTTACTATGAATAA 1245 0.3896 MMKWGGRKHSSASSSSSSSSFISHASPFSWLSKFKHMRINSESAGKTKHKAKQSGSPQYSCEYGEDKYCVKDDDGAFCRQLPFNEESYEDKKNKDIDDNVKVISCSTTSCLGVRRDAKKHGKREGTLKLKEKDNIGLGEERKLLNDGKVSKEMDEYNREKEYENLRRRFERKAQKAFQEQLLTLGREVEEVEFGSSKTVEKEDVLQYESPRTICTPRTHAFSTSSVSKNPILGNITEEIEKTERLSPKKMSSERQNLKQSEELKRQKQPHHLPPSRELQRRKQKPSSRVKIHSPRMVSKVEICKIKALEDMKKAKLKTKKKREETVEETPGLESFAVIKSSLDPKQDFRDSMIEMIIENQISKPEEMEDLLACYLTLNADEYHDLIIKVFRQVWSDMTRGGLGIKLNLQWSYYE 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01996 414 MobiDBLite consensus disorder prediction 216 293 - -
Gma13g01996 414 MobiDBLite consensus disorder prediction 41 60 - -
Gma13g01996 414 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 11 407 IPR038933 GO:0045892
Gma13g01996 414 Coils Coil 159 179 - -
Gma13g01996 414 MobiDBLite consensus disorder prediction 1 23 - -
Gma13g01996 414 PANTHER TRANSCRIPTION REPRESSOR OFP4 11 407 - -
Gma13g01996 414 MobiDBLite consensus disorder prediction 8 23 - -
Gma13g01996 414 Pfam Transcriptional repressor, ovate 341 397 IPR006458 -
Gma13g01996 414 MobiDBLite consensus disorder prediction 237 284 - -
Gma13g01996 414 ProSiteProfiles OVATE domain profile. 337 396 IPR006458 -
Gma13g01996 414 MobiDBLite consensus disorder prediction 216 232 - -
Gma13g01996 414 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 336 397 IPR006458 -
Gma13g01996 414 Coils Coil 308 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01996 Gma-Chr13 35231669 35232913 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Gma13g01996 Ovate 5.6e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01996 - - gmx:102666239 790.801
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00814 15 6708982 6711202 Gma13g01996 13 35231669 35232913 GST
Gma05g01615 05 37923906 37925027 Gma13g01996 13 35231669 35232913 PCT
Gma08g01102 08 9356527 9357768 Gma13g01996 13 35231669 35232913 PCT
Gma13g01996 13 35231669 35232913 Gma05g01615 05 37923906 37925027 PCT
Gma13g01996 13 35231669 35232913 Gma08g01102 08 9356527 9357768 PCT