Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01983 ATGGGGGTTGCCAATTTCTCTGTCTTCCTACTTATTATTTCTCTAAGTTTCTTCCAGTTGCTGAGAATTTCTGAATCAAAATTACCCAAAGAAGAAGTTGATGCTCTTAAAGAAATTGTGAGCACAATGGGTGCGACATATTGGAAGTTTGATGCTGATTCCTGCAATATTGAAATGGTTGGAGTAACACTAGAACCACCAGATGAATCAGAGAGAAGAATTGGTTGTGATTGCAGTTTTGAAGACGGCACTGTCTGTCATGTTGTGAACATGACTCTCAAGCGCCTTAGTCTACCGGGCATACTCCCACCTCAACTGGCCAAGCTACCTTTTCTCCGATTTGTAGATTTTGCTTACAATTGCTTCACCGGCACAATTCCAGAGGAATGGGCTTCTCTGAACCTAACTTCAATCTCTCTTCTTGTGAATCGGTTATCTGGGGAAATTCCGAAGCATCTAGGAAATATTACTTCTCTCACATACCTGATGCTCGAAGCAAACCAATTTTCTGGTGATGTTCCAACTGAGCTTGGGAAACTAATCAACTTGCAGACCTTGGTTCTGTCATCCAATCAATTGACTGGGAGCTTTCCACCTTCACTTGCAGGACTACAAAACTTGACCGACTTTAGAATAAGTAATAACAATTTTACTGGAACCATACCAAATTTTATACAGAATTGGCAACAACTCAAAAGACTAGAAATGCATGGAAGTGGACTAGAGGGACCCATTCCATCAAATATCTCTCTCTTGAATAACTTAGAACAGCTAAGAATCAGTGATATAGAAAGTCCTAGCCAGGACTTTCCTTTTCTGGGGAACATGGCAGGCTTGATTACTTTGGTTTTAAGGAATTGTAACTTATCTGGTGTGATACCTTCATATATCTGGACGATGATGGCTTTGGAGAATTTGGATGTCAGTTTTAACATGCTTGTTGGGCAAATTCCAGCAGTTATAAGTGCAAGGCGTCTAAGATATATCTACCTAACAGGTAATATTCTTAGTGGCAATATACCAAATTCAGTCCTGAAGGACGGAAGTAGCATTGATCTTTCATACAACAACTTTACTTGGCAAGATGATGACCAGCCTGCTTGTCAGGACAGCATTAGGAACTTGAATCTGAATTTGTTCAGAAGCTCGATTAAGGAGAATAAGTTAGAGGAGTATGTTCCTTGCTCCAAGAATTTCATCTGTCCACGGTATTCAAGTTGTTTACATGTTAACTGTGGAGGGAAGGATGTAAATGTAAAAGATGATAAAGGAGAAAACCTTTATGTGGGAGATGATGTTCAGGGTGGCACTGCAACTTATTTCTACAGTTCCAATGATCACTGGGGATTTAGTAGCACCGGAGACTTTATGGATGATTTCGATGGCCAGAACATACGTTACACAGTATCATCTCCATCTTCAAATATGCCTGAATTATACAAAACAGCACGTATATCTCCAATTACACTTACTTATTTCCATAATTGCATGGAAAATGGGAACTATACTGTAAACCTCCATTTTGCTGAGATACAGTTTACAAATGATAAAACATTTAGAAGTCTTGGGAAGCGCATATTTGATATCTATGTTCAGGGAAAACTGATTCGCAAAAATTTTGATATAGAGAATGAGACAAATGTTGCTGAGAAACCACTGGTACTGCCTATATACAATATCAGCATTACAAATAATGTCTTGGAGATTCGGTTCTACTGGGCTGGAAAAGGAACTACTAGAATTCCGGATGTTGGAGTTTATGGTCTCCTTGTATCAGCTTTTTCTGTGGTTTCAAATTCTAGAGTTTGCTCAAATGGAGAAAAGAAAGTTTCTGTTTCTATAATAATTGCAATTGTAGTTGGTGCTCTATGCTTAGTGCTGTTTACATCTGGATTCATTTGGTGGAAGTGGAAAGGCTTTTTCAGAGGGAAACTGCGAAGGGCAGGTACAAAAGATAGAGATACTCAGGCAGGCAATTTTAGCTTGGAGCAGATCAGAGTTGCTACTGATGACTTCTCTTCTGCTAATAAGATTGGGGAAGGTGGTTTTGGTCCTGTATACAAGGGTCAATTGCTAGATGGTACTTTTATAGCGGTCAAGCAACTGTCATCAAAATCACGGCAGGGAAATCGTGAATTTATAAATGAAATAGGCTTGATATCTTGTGTGCAACACCCTAACCTTGTAAAGCTTTATGGATATTGTGCTGAAGGAGAACAACTCTTGCTGGTATATGAGTACTTGGAAAATAACAGCCTTGCCCGAGTTTTATTTGGTAGTGAAAACAAGCAGCTTAAATTGGACTGGCCCACGAGGTTTAGGATTTGCATTGGCATAGCAAAAGGTTTAGCATTTCTACATGATGAGTCAAGATTCAAGATAGTTCACAGAGATATCAAGGCTTCTAATGTGTTACTCGATGACAAATTGAATCCAAAGATATCTGACTTTGGCTTGGCTAAGCTTGATGAAGCAGAGAAGACGCATATCAGCACCCGAGTTGCTGGGACTATaggatatatggcaccagaatatgcattatggggctaccttactgacaaggctgatgtttacagttttggagttgtggcattagaaattgttagtgggaaaAGCAATAACAATTATTTACCAGATGATGGAAGTGTTTGTCTTTTGGATCGGGCATGTCAGTTAAACCAAACTCGGAACTTGATGGAGCTGATTGATGAAAGGTTGGGGCCAGACCTTAATAAAATGGAAGTAGAAAAGGTGGTCAAAATAGGTCTCCTGTGCTCAAATGCTTCTCCAACACTTAGGCCTACAATGTCTGAAGTAGTGAATATGCTTGAAGGACATGCAGATATTCCTGATGTAATCCCAGAACCAAGTACCTACAATGATGATTTAAGGTTCAAAGCCTTAAGGAATCTCCATCAATATCAATCAAAACAGAGTTTGAGTGGAAACCAGAGCCAGAGTTCAATGACACATACATTCACCTCAGCATCTGGTGGTAATACTCACACTACTAGTTATATTGAGGATCATAGTTCAGTTGACAGTAGTTAG 3051 0.3812 MGVANFSVFLLIISLSFFQLLRISESKLPKEEVDALKEIVSTMGATYWKFDADSCNIEMVGVTLEPPDESERRIGCDCSFEDGTVCHVVNMTLKRLSLPGILPPQLAKLPFLRFVDFAYNCFTGTIPEEWASLNLTSISLLVNRLSGEIPKHLGNITSLTYLMLEANQFSGDVPTELGKLINLQTLVLSSNQLTGSFPPSLAGLQNLTDFRISNNNFTGTIPNFIQNWQQLKRLEMHGSGLEGPIPSNISLLNNLEQLRISDIESPSQDFPFLGNMAGLITLVLRNCNLSGVIPSYIWTMMALENLDVSFNMLVGQIPAVISARRLRYIYLTGNILSGNIPNSVLKDGSSIDLSYNNFTWQDDDQPACQDSIRNLNLNLFRSSIKENKLEEYVPCSKNFICPRYSSCLHVNCGGKDVNVKDDKGENLYVGDDVQGGTATYFYSSNDHWGFSSTGDFMDDFDGQNIRYTVSSPSSNMPELYKTARISPITLTYFHNCMENGNYTVNLHFAEIQFTNDKTFRSLGKRIFDIYVQGKLIRKNFDIENETNVAEKPLVLPIYNISITNNVLEIRFYWAGKGTTRIPDVGVYGLLVSAFSVVSNSRVCSNGEKKVSVSIIIAIVVGALCLVLFTSGFIWWKWKGFFRGKLRRAGTKDRDTQAGNFSLEQIRVATDDFSSANKIGEGGFGPVYKGQLLDGTFIAVKQLSSKSRQGNREFINEIGLISCVQHPNLVKLYGYCAEGEQLLLVYEYLENNSLARVLFGSENKQLKLDWPTRFRICIGIAKGLAFLHDESRFKIVHRDIKASNVLLDDKLNPKISDFGLAKLDEAEKTHISTRVAGTIGYMAPEYALWGYLTDKADVYSFGVVALEIVSGKSNNNYLPDDGSVCLLDRACQLNQTRNLMELIDERLGPDLNKMEVEKVVKIGLLCSNASPTLRPTMSEVVNMLEGHADIPDVIPEPSTYNDDLRFKALRNLHQYQSKQSLSGNQSQSSMTHTFTSASGGNTHTTSYIEDHSSVDSS 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01983 1016 MobiDBLite consensus disorder prediction 976 1016 - -
Gma13g01983 1016 SUPERFAMILY L domain-like 82 342 - -
Gma13g01983 1016 Gene3D Transferase(Phosphotransferase) domain 1 748 952 - -
Gma13g01983 1016 CDD STKc_IRAK 678 945 - -
Gma13g01983 1016 ProSitePatterns Serine/Threonine protein kinases active-site signature. 794 806 IPR008271 GO:0004672|GO:0006468
Gma13g01983 1016 Gene3D Ribonuclease Inhibitor 267 408 IPR032675 -
Gma13g01983 1016 Gene3D Ribonuclease Inhibitor 195 266 IPR032675 -
Gma13g01983 1016 Gene3D Ribonuclease Inhibitor 41 194 IPR032675 -
Gma13g01983 1016 Pfam Malectin domain 407 593 IPR021720 -
Gma13g01983 1016 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 66 990 - -
Gma13g01983 1016 Pfam Leucine rich repeat 158 217 IPR001611 GO:0005515
Gma13g01983 1016 Gene3D - 409 600 - -
Gma13g01983 1016 ProSiteProfiles Protein kinase domain profile. 672 949 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g01983 1016 SMART serkin_6 672 943 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g01983 1016 Gene3D Phosphorylase Kinase; domain 1 643 747 - -
Gma13g01983 1016 SUPERFAMILY Protein kinase-like (PK-like) 656 975 IPR011009 -
Gma13g01983 1016 PANTHER RECEPTOR-LIKE KINASE IN FLOWERS 1-RELATED 66 990 - -
Gma13g01983 1016 Pfam Protein tyrosine and serine/threonine kinase 675 943 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01983 Gma-Chr13 35125212 35135201 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01983 1 838 Receptor kinase-like Gene Family AT1G29750 57.464 0.0 991
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma13g01983 PK_Tyr_Ser-Thr 4.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01983 - - qsu:111995633 1358.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01621 05 37969642 37981188 Gma13g01983 13 35125212 35135201 PCT
Gma13g01983 13 35125212 35135201 Gma05g01621 05 37969642 37981188 PCT