Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01981 ATGAAAAGCCACACCAAAACACTAGATTTAGGATATGCTGGCACgagcaagaagcaaGGAAGAGCAAAGTGGTGGAGTTTGGGAACATGCAAACCAGGGCAGTGTCTATCTTGGTCCACACAATCATCTTCTTTGGTCTCATTACCATCTTTCTTGTTGCTATTGGCTAAATGCTTGGAAACTGGCGAGCCAGTGGCCATTAAGAAGGTTTTACTGGACAAAAGATATAAGAATCGTGAGCTACAGTTAATGCACTTGATGGATCATCCAAATGTGATCTCTCTGAAGCATCGTTTCTTTTCCACTACAAGTGCAGATGAACTTTTTCTTAATTTGGTGATGGAATATGTTCCAGAGTCTATGTATCGAGTCTCAAAGTTCTATAGTAATACTAATCAGAGCATGCCACTTATTTATGTAAAACTTTACATGCACCAGATTTTCAGGGGGCTGGCTTATATCCACACTGTTCCTGGAGGTTGCCACAAAGATTTGAAGCCTCAAAATATACTGGTTGACCCTCTTACACACCAGGTTAAGATATGTGATTTTGGAAGTGCAAAAGTGCTGGTCAAAGGTGAAGCTAATATATCACATATATGTTCACTTTTCTACCGGGCACCAGAACTTATGTTTGGTGCCACTGAGTATACTACTTCAATTGATATTTGGTCAGCTGGCTGTCCCTTATTACCTGGCGAAAATGCACTGGACCAGCTTGTAGAGATTATCAAGGTTACTCAAATGAAGCAGGAGCATGACAAGAGGCAAGCAAGCCTCATAGCTGAACACAACGAACAGCTAAAGCGTACCCAACTGCAAGCTGAAAATGAATTGAGAGAGAAAACAATCTGGAAGAGGAGTTGCATCTTCAAAAAATCCAAAGAAGACAGGCAAAGGGCTTTGTTGCAGTTGCAGTGGAAAGTGATGAGTGACAAGCCTAAAGAGGACCAAGAAGTGAATTCAAAACAGGCACAGTTGGGGAAATGA 990 0.4091 MKSHTKTLDLGYAGTSKKQGRAKWWSLGTCKPGQCLSWSTQSSSLVSLPSFLLLLAKCLETGEPVAIKKVLLDKRYKNRELQLMHLMDHPNVISLKHRFFSTTSADELFLNLVMEYVPESMYRVSKFYSNTNQSMPLIYVKLYMHQIFRGLAYIHTVPGGCHKDLKPQNILVDPLTHQVKICDFGSAKVLVKGEANISHICSLFYRAPELMFGATEYTTSIDIWSAGCPLLPGENALDQLVEIIKVTQMKQEHDKRQASLIAEHNEQLKRTQLQAENELREKTIWKRSCIFKKSKEDRQRALLQLQWKVMSDKPKEDQEVNSKQAQLGK 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01981 329 Gene3D Phosphorylase Kinase; domain 1 53 118 - -
Gma13g01981 329 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 36 288 - -
Gma13g01981 329 SMART serkin_6 51 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g01981 329 PANTHER SHAGGY-RELATED PROTEIN KINASE ETA 36 288 - -
Gma13g01981 329 Pfam Protein kinase domain 58 231 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g01981 329 ProSiteProfiles Protein kinase domain profile. 2 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g01981 329 SUPERFAMILY Protein kinase-like (PK-like) 55 249 IPR011009 -
Gma13g01981 329 Gene3D Transferase(Phosphotransferase) domain 1 119 325 - -
Gma13g01981 329 CDD STKc_GSK3 55 246 IPR039192 -
Gma13g01981 329 Coils Coil 261 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01981 Gma-Chr13 35109701 35115440 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01981 61 270 Core Cell Cycle Gene Families AT3G48750 32.301 1.36e-31 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Gma13g01981 Pkinase 1.2e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01981 K14502 - gmx:100817372 404.445