Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01959 ATGGAAAATTTTAGTTCAAGTTACATTTATTACTGGGTTCTACTACCCTTTTTTTTGTTATCACAATTCTCCTTTCAACTTGCATGGTGTGGCTCCATAGTAAAGTTCCTTCCTGGATTCAAGGGACCCCTTCCTTTTGTACTTGAAACCGGGTATGTGGGAGTGGGTGAATCAGAGGATGTGCAGGCATTCTACTACTTCATTGAGTCAGAGAACAATCCCAAGAAAGATCCTCTCATGCTTTGGCTCACTGGTGGCCCTGGTTGCTCAGCCTTATCTGGACTTGTGTTTGAAATAGGACCACTTACATTCAAATATGAGGAATACAATGGGAGCCTGCCCAATTTGGTCTTGAGGCCACACTCATGGACAAAGgttagtagcattatatttgtagacttgcctgtttccacgggcttcacttatgccacaacagagtttgctgctcaacgaagcgactggattctagttcaccaagtccatcagtttcttaggaagtggttgattgatcatccaaatttttcgtcaaatgaagtttacattggtggcgattcatactctggcattcctattccagtgattgttcaagaaatttcacgagGAAATGAAAAAGGGCTCCAACCATGGATAAATCTCCAGGGATACCTGCTGGGAAATGCAGCAACAACTCGAAGGGAAAAAAACTATCAAATTCCCTTCGCTCATGGAATGGGACTTATTTCTGATGAACTATATGGGTCACTGCAAAAAAATTGTAAAGAAGAGTACATAAATGTAGACACCAGAAATGTATTATGTTCTAGAGATATCGAGTCATTCAATGAGGTTACATCAGGACTTAATTCAGCCCATATTTTGGACCCGTCATGTGAGTGGCTTGATACTGAAACATCTTGGAGGAGATCTCTACTTAAGAAATATCCCAGAAAGAATTTCCTTAATACTCACCTCAAATTGGCACCCTTAAACTGTCGGAGTTATGTATACTTCCTCTGCGGTTATTGGGCCAATGATGATAATGTTCGCACTGCACTGCACATCCGTAAGGGAAGTATAGGAAAATGGCATCGTTGTACCTTCGATATACCTAACAAGAAGGATATCTCAAGCAGCTATGAGTATCATGTAAATCTCAGTAGAAAAGGCTACCGTTCGCTGATATACAGTGGCGATCATGACATGACAATTCCTTTCTTGGCAACTCAAGCATGGATAAGATCTTTAAACTACTCCATTGTGGATGAGTGGAGGCAATGGCATACAAATGGTCAAGTTGCAGGATACACAAGGACTTACTCCAATCGGATGACATTTGCAACTGTGAAGggaggaggccacacagctccggagtacaagcctgatgaatgctttgccatgttcagtaggtggatatctaacagggctttgtag 1410 0.3227 MENFSSSYIYYWVLLPFFLLSQFSFQLAWCGSIVKFLPGFKGPLPFVLETGYVGVGESEDVQAFYYFIESENNPKKDPLMLWLTGGPGCSALSGLVFEIGPLTFKYEEYNGSLPNLVLRPHSWTKVSSIIFVDLPVSTGFTYATTEFAAQRSDWILVHQVHQFLRKWLIDHPNFSSNEVYIGGDSYSGIPIPVIVQEISRGNEKGLQPWINLQGYLLGNAATTRREKNYQIPFAHGMGLISDELYGSLQKNCKEEYINVDTRNVLCSRDIESFNEVTSGLNSAHILDPSCEWLDTETSWRRSLLKKYPRKNFLNTHLKLAPLNCRSYVYFLCGYWANDDNVRTALHIRKGSIGKWHRCTFDIPNKKDISSSYEYHVNLSRKGYRSLIYSGDHDMTIPFLATQAWIRSLNYSIVDEWRQWHTNGQVAGYTRTYSNRMTFATVKGGGHTAPEYKPDECFAMFSRWISNRAL 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01959 469 Gene3D - 327 468 - -
Gma13g01959 469 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 11 468 IPR001563 GO:0004185|GO:0006508
Gma13g01959 469 PANTHER 1-O-ACYLGLUCOSE:ANTHOCYANIN ACYLTRANSFERASE 11 468 - -
Gma13g01959 469 Pfam Serine carboxypeptidase 38 466 IPR001563 GO:0004185|GO:0006508
Gma13g01959 469 Gene3D alpha/beta hydrolase 31 300 IPR029058 -
Gma13g01959 469 SUPERFAMILY alpha/beta-Hydrolases 34 467 IPR029058 -
Gma13g01959 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 119 131 IPR001563 GO:0004185|GO:0006508
Gma13g01959 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 132 142 IPR001563 GO:0004185|GO:0006508
Gma13g01959 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 167 192 IPR001563 GO:0004185|GO:0006508
Gma13g01959 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 436 449 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01959 Gma-Chr13 34884025 34888685 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01959 28 57 Calmodulin-binding Proteins AT2G22960 73.333 3.40e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01959 K16296 - gmx:100792006 973.77