Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01942 ATGGAGACTGGTGGTGGACGCGATTCTGGCATGAGTTCTGAGACTATCAATTCCTCCACTCAAAGAACTTCAATGAGCAACGAGAGCGTTTGCAGCACCAGCTTCAGCCGTCTCTCCTTCGATCTCCCTCCTCCTTCTTCTTCCCCTGAGACCCTCTTCGTCAAACCCCACCGCTCCTCCGACTTCGCCTACTCCGCCATCCTCCGCCGCAAGTCCGCCCTCACCTTCCGCGACTTCCACCTCCTCCGCCGCATCGGCGCCGGCGACATCGGCACCGTCTACCTCTGCCGTCTCCGCCACGACGCCGGCGACGAGGACGACGACGAGGACCCCTGTTTCTACGCGATGAAGGTGGTGGACAAGGAGGCGGTGGCGCTGAAGAAGAAGGCGCAGAGAGCGGAGATGGAGAGGAAGATTCTGAAGATGGTGGACCATCCGTTCCTCCCTACGCTCTACGCGGAGTTCGAGGCTTCGAATTTCTCATGCATTGTGATGGAGTATTGCTCCGGTGGGGACTTGCACTCCCTTCAACACAACCACCCCAATAACCGATTCTCTCTCTCCTCTGCCAGGTTTTACGCGGCTGAAGTACTGGTTGCGTTGGAGTATCTCCACATGCTGGGAATCATCTACAGGGATCTGAAGCCCGAAAACGTGTTGGTCAGATCAGACGGTCACATCATGCTTTCCGACTTCGATCTCTCTCTATGCTCCGATGCTATCCCAGCCGTTGAATCCCCTGACTGTTCACTGGACCCCGCATTCGCACCCGCGTTACGCTACACTCGCCAGTACTCCACCCCCTTCTCCTGCCTCTCGAACCGCGTATTCCGGTCCAGGAAGGTCCAGACCCTCCAACCCAACCGCCTCTTCGTGGCCGAACCGGTCGGGGCCCGCTCGTGCTCCTTCGTTGGGACCCACGAGTACGTGTCGCCGGAAGTGGCCTCCGGGAACTCACACGGCAATGCCGTCGACTGGTGGTCCTTCGGGATATTCATCTACGAGATGGTGTACGGTCGAACACCCTTCGCGGGATCATCGAACGAGGCTACGCTGCGAAGCATCATCAAAAAGCCCCTCGCATTTCCCACCTCCACGCCCTCCAGTACGCTTGAAATGCACGCGCGGGACCTCATATCAGGGTTGCTCAACAAGGACCCGAACCGCAGGCTCGGGTCCAAACGAGGCTCTGCGGACGTCAAAAAACACCCCTTCTTCGCGGGGCTCAATCTCGCGCTCATCCGGACGGTCACGCCGCCGGAGGTTCCATCACTCAGAAGGCATAAAACGACGCCGTTTTACTACCCCGGCAACGTAAATAACAGTAGACAGCAGCTAACGGCGTTTGATTACTTTTGA 1359 0.5798 METGGGRDSGMSSETINSSTQRTSMSNESVCSTSFSRLSFDLPPPSSSPETLFVKPHRSSDFAYSAILRRKSALTFRDFHLLRRIGAGDIGTVYLCRLRHDAGDEDDDEDPCFYAMKVVDKEAVALKKKAQRAEMERKILKMVDHPFLPTLYAEFEASNFSCIVMEYCSGGDLHSLQHNHPNNRFSLSSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSDAIPAVESPDCSLDPAFAPALRYTRQYSTPFSCLSNRVFRSRKVQTLQPNRLFVAEPVGARSCSFVGTHEYVSPEVASGNSHGNAVDWWSFGIFIYEMVYGRTPFAGSSNEATLRSIIKKPLAFPTSTPSSTLEMHARDLISGLLNKDPNRRLGSKRGSADVKKHPFFAGLNLALIRTVTPPEVPSLRRHKTTPFYYPGNVNNSRQQLTAFDYF 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01942 452 SUPERFAMILY Protein kinase-like (PK-like) 59 432 IPR011009 -
Gma13g01942 452 PANTHER FLIPPASE KINASE 1-RELATED 4 447 - -
Gma13g01942 452 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
Gma13g01942 452 Pfam Protein kinase domain 79 235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g01942 452 Pfam Protein kinase domain 301 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g01942 452 Gene3D Transferase(Phosphotransferase) domain 1 299 424 - -
Gma13g01942 452 MobiDBLite consensus disorder prediction 1 28 - -
Gma13g01942 452 SMART serkin_6 79 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g01942 452 Gene3D Transferase(Phosphotransferase) domain 1 168 235 - -
Gma13g01942 452 Coils Coil 116 136 - -
Gma13g01942 452 Gene3D Phosphorylase Kinase; domain 1 77 167 - -
Gma13g01942 452 ProSiteProfiles Protein kinase domain profile. 79 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g01942 452 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 4 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01942 Gma-Chr13 34743252 34746053 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01942 8 452 AGC Kinase Gene Family AT2G34650 67.261 0.0 580
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Gma13g01942 Pkinase 1.1e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01942 - - gmx:100795536 885.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g01942 13 34743252 34746053 Gma13g01942 13 34743252 34746053 ECH