Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01932 ATGAGGAGGAACTGCAACTTGGAACTTGCCCTTTTTCTTCCCTCTGATTCTGGCCCCCGCCACCACCACTCAATGGTTGAAGAAGCTAGTGAAATAAGCCCAATCCAAAATTTCTTCCATCACCACCACCGCCAGGAACAGCAACAGCAACAGCCGCTCACCATTTTCTATGATGGAAATATTTGTGTTGCGGATGTCACAGAGCTTCAGGCCAAATCGATTTTATTGCTTGCAAATAGAAAATTGGAGGAAAGAGTGAGGACACCAACTGGGTCAGAGCCATCTTCACCAGCAGTGATGCAATCTAACAATCAATTGTATAGTCCTGGCACTGGCCTTTCCATGAGAAAATCGTTGCAAAGGTTCCTTCAGAAGAGAAAGAATCGGGTCCAAGAAGCATCGCCATACCATCACTAG 417 0.4604 MRRNCNLELALFLPSDSGPRHHHSMVEEASEISPIQNFFHHHHRQEQQQQQPLTIFYDGNICVADVTELQAKSILLLANRKLEERVRTPTGSEPSSPAVMQSNNQLYSPGTGLSMRKSLQRFLQKRKNRVQEASPYHH 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01932 138 PANTHER - 1 138 - -
Gma13g01932 138 MobiDBLite consensus disorder prediction 89 112 - -
Gma13g01932 138 Pfam tify domain 47 79 IPR010399 -
Gma13g01932 138 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 1 138 IPR040390 -
Gma13g01932 138 SMART tify_2 46 80 IPR010399 -
Gma13g01932 138 Pfam Jas motif 116 136 IPR018467 -
Gma13g01932 138 ProSiteProfiles Tify domain profile. 46 80 IPR010399 -
Gma13g01932 138 MobiDBLite consensus disorder prediction 82 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01932 Gma-Chr13 34624212 34627474 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01932 1 137 Tify Gene Family AT1G30135 41.727 2.49e-25 91.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Gma13g01932 tify 1.1e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01932 - - gmx:100500349 264.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g01932 13 34624212 34627474 Gma13g01932 13 34624212 34627474 ECH
Gma15g00880 15 7300596 7303428 Gma13g01932 13 34624212 34627474 GST