Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01908 ATGGTTACGTTCAGGTTTCACCAGTACCAGGTGGTCGGGAGGGCTCTCCCAACGGAAGCAGATCAGCATCCGAAGATCTACCGAATGAAGCTCtgggccaccaacgaggttcgcgccaagtctaagttctggtattttttgaggaagctgaagaaggtgaagaagagcaatggtcaagttcttgctatcaacgagATTTTTGAGAAGAACCCAACCAAGATTAAGAACTACGGGATATGGTTGCGGTATCAGAGTAGGACTGGTTACCACAACATGTACAaggagtaccgcgataccactctaaacggttcagttgaggcaatgtacaatgagatggcttctcgccacagggtcaggagcccatgcatccaaattatcaagactgcaaccatcccagctaagctttgcaagagggagagcaccaagcaattccacaactccaaaatcaagttcccattggtcttccagaaagttagaccacctaccaggaagctgaagaccacatacaaggccaaaAAGCCCAATTTGTTTATGTAA 537 0.1695 MVTFRFHQYQVVGRALPTEADQHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGSVEAMYNEMASRHRVRSPCIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVFQKVRPPTRKLKTTYKAKKPNLFM 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01908 178 SUPERFAMILY RplX-like 71 146 - -
Gma13g01908 178 Gene3D - 1 71 - -
Gma13g01908 178 Pfam Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A 7 128 IPR023573 GO:0003735|GO:0005840|GO:0006412
Gma13g01908 178 Hamap 50S ribosomal protein L18Ae [rpl18a]. 6 69 IPR028877 -
Gma13g01908 178 PANTHER 60S RIBOSOMAL PROTEIN L18A 138 178 IPR028877 -
Gma13g01908 178 PANTHER 60S RIBOSOMAL PROTEIN L18A 1 137 IPR028877 -
Gma13g01908 178 PANTHER 60S RIBOSOMAL PROTEIN L18A 138 178 - -
Gma13g01908 178 PANTHER 60S RIBOSOMAL PROTEIN L18A 1 137 - -
Gma13g01908 178 PIRSF Ribosomal_L18a 1 178 IPR021138 GO:0003735|GO:0005840|GO:0006412
Gma13g01908 178 Gene3D - 72 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01908 Gma-Chr13 34396104 34398366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01908 1 178 Cytoplasmic Ribosomal Protein Gene Family AT2G34480 90.449 1.42e-121 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01908 K02882 K22683 gmx:100500108 369.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g01908 13 34396104 34398366 Gma13g01908 13 34396104 34398366 ECH
Gma15g00901 15 7513415 7515465 Gma13g01908 13 34396104 34398366 GST