Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01904 ATGGCCCCATTGGCATGTTTGCGGCTTCCCACCCGAATCCGCCTCCGAACCTCCCACGACCCGGACTCAATCCTCTCCCTCTTCAAATCCCACGGCTTCTCCGACTCCCAAATCCGCCGCATCATTCAAACATACCCTTACTTCCTCTCCTACAACTCCCGCAAAATTATCCTCCCCAAACTCAACTTCCTCCTCTCCAAAGGCGCCTCCACCCCCGACCTCATCCGCATCATCACCAAAAACCCTAAAATCCTCCGCTTAAGCCTCTACAACTCCATCACCCCACGTTACGATTTCATAAAAAGATTCATGCTTTCCGACGATTCCACTCTCCGCTCCGTCAAAGTTTGCCCCTGCATTATGCTTTCTAAGAATCCTCTTCTTAACATCGAATTTCTCCTCCACAACGGTGTCCCAGAATCCAAGGAGGTTATGGAATTGGGCTTCGAGACCAGCAAAACGATGTTCTTGATAGCACTTCGTGCTAAGCTTGTGAGGAAATCGTTGTGGGAGAGGAAGGTTGAGGTGTATAGGAAATGGGGTTGGTCTCAGGAGGTTGTTCTTTCTACGTTTGTGAGGAACCCCTGGTGTATGCTTGTGTCTGAGGGGAAAATTGAGGCTATGATGGAGTTTTGTGTTATTCATTTGGGTTGGGATGCTTTGCTTTTTGCTAAGTATCCGGTGCTTGTTGCGCTGAGTTTGGAGAAAAGGGTTGTTCCCAGGGCTGCTGTGTTGCAGTTTCTTTTGTCTAAAGGTTTGGTTAAGGATGTTAATTGGGCCTCCGCGTTTTTAGTCTCTGATAAGATTTTCTTGCAGAAATTTGTGGTTTCCTTTGAGAAGGAAGCCGATCGGCTTTTGAAGCTCTATGAAGAGAAGATGATGTTCCTAGATAACACTCACTGA 903 0.4751 MAPLACLRLPTRIRLRTSHDPDSILSLFKSHGFSDSQIRRIIQTYPYFLSYNSRKIILPKLNFLLSKGASTPDLIRIITKNPKILRLSLYNSITPRYDFIKRFMLSDDSTLRSVKVCPCIMLSKNPLLNIEFLLHNGVPESKEVMELGFETSKTMFLIALRAKLVRKSLWERKVEVYRKWGWSQEVVLSTFVRNPWCMLVSEGKIEAMMEFCVIHLGWDALLFAKYPVLVALSLEKRVVPRAAVLQFLLSKGLVKDVNWASAFLVSDKIFLQKFVVSFEKEADRLLKLYEEKMMFLDNTH 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01904 300 Gene3D Transcription termination factor 3, mitochondrial 5 287 IPR038538 -
Gma13g01904 300 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 11 141 - -
Gma13g01904 300 Pfam mTERF 197 270 IPR003690 GO:0003690|GO:0006355
Gma13g01904 300 Pfam mTERF 25 211 IPR003690 GO:0003690|GO:0006355
Gma13g01904 300 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 142 296 - -
Gma13g01904 300 PANTHER CGI-12 PROTEIN-RELATED 11 141 IPR003690 GO:0003690|GO:0006355
Gma13g01904 300 PANTHER CGI-12 PROTEIN-RELATED 142 296 IPR003690 GO:0003690|GO:0006355
Gma13g01904 300 SMART mt_12 75 106 IPR003690 GO:0003690|GO:0006355
Gma13g01904 300 SMART mt_12 111 139 IPR003690 GO:0003690|GO:0006355
Gma13g01904 300 SMART mt_12 39 70 IPR003690 GO:0003690|GO:0006355
Gma13g01904 300 SMART mt_12 188 219 IPR003690 GO:0003690|GO:0006355
Gma13g01904 300 SMART mt_12 220 254 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01904 Gma-Chr13 34363786 34364759 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gma13g01904 mTERF 2.7e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01904 K15032 - gmx:102663105 468.774