Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01811 ATGATCTCGTCAATGAAATGCACAGCCTCATCTCTCACATGTTCTGCTTTCTCAAACAGAAAGCTTCCCATTGCAAGGCCTCAACTCGTGACATTACCAACCATCAACAACGTTGAACAAAACATGGGTCCCTCTCAGTTGTGTTCACAGAAGCCTCTCTACCTTTCATCCACCGAGAACTTGGCATTGGTGAGGAGAAGGAGAGTGACGGAGTGCCAGGCCTATGAAGCTGACAGGTCACGGCCTCTGGAGATCAACATTGAGCTGCCGGCTGAAGAGGCGGCGCAGAGGTTCAAGATTGGTGTGTATTTTGCTACATGGTGGGCTTTGAATGTAGTTTTCAACATTTACAATAAGAAGGTTTTGAATGCTTTTCCTTACCCATGGCTCACCTCCACTTTGTCCCTTGCTGCTGGCTCCCTCATGATGTTAGTCTCATGGGCCACCAGGGTTGCTGAGGTCCCAAAAGTCAACTTGGACTTCTGGAAGGCCTTGTTTCCTGTTGCGGTGGCACACACAATTGGGCATGTTGCTGCAACTGTGAGCATGTccaaggttgctgtttcattcactcacatcatcaagagtggagagccagctttcagtGTCCTTGTGTCAAGGTTCTTGCTCGGAGAAGCATTCCCAATGCCGGTTTATCTGTCACTGCTGCCAATTATTGGTGGTTGTGCACTAGCTGCAGTGACTGAGCTCAATTTCAACATGATTGGCTTCATGGGGGCTATGATATCAAATTTGGCATTTGTCTTCCGCAATATATTCTCAAAGAAAGGGATGAAGGGAATGTCTGTTAGTGGAATGAACTACTATGCTTGTCTTTCCATAATGTCACTGTTAATTCTGACACCTTTTGCCATTGCTGTTGAGGGCCCCAAGGTTTGGGCTGCAGGCTGGCAAACAGCTGTATCTCAAATTGGTCCCAATTTTGTATGGTGGGTAGCTGCACAGAGTGTCTTTTACCACTTGTACAATCAAGTCTCATACATGTCTCTTGATCAGATTTCTCCCTTAACATTTAGCATTGGAAACACAATGAAGAGGATTTCGGTCATTGTTTCTTCCATCCTTATCTTTCACACGCCTGTTCAGCCCATCAATGCTCTTGGTGCTGCCATTGCAATTCTTGGCACCTTCCTCTATTCACAGGCTAAACAGTAA 1176 0.4396 MISSMKCTASSLTCSAFSNRKLPIARPQLVTLPTINNVEQNMGPSQLCSQKPLYLSSTENLALVRRRRVTECQAYEADRSRPLEINIELPAEEAAQRFKIGVYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLAAGSLMMLVSWATRVAEVPKVNLDFWKALFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGEAFPMPVYLSLLPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGMSVSGMNYYACLSIMSLLILTPFAIAVEGPKVWAAGWQTAVSQIGPNFVWWVAAQSVFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSILIFHTPVQPINALGAAIAILGTFLYSQAKQ 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01811 391 Pfam Triose-phosphate Transporter family 99 387 IPR004853 -
Gma13g01811 391 PANTHER SOLUTE CARRIER FAMILY 35 25 391 - -
Gma13g01811 391 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 99 390 IPR004696 GO:0016021|GO:0022857|GO:0055085
Gma13g01811 391 SUPERFAMILY Multidrug resistance efflux transporter EmrE 290 388 - -
Gma13g01811 391 SUPERFAMILY Multidrug resistance efflux transporter EmrE 141 234 - -
Gma13g01811 391 PANTHER GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC-LIKE 25 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01811 Gma-Chr13 33410503 33413559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01811 36 391 Antiporters AT1G61800 81.180 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01811 K15283 K05350 gmx:100804205 751.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g01811 13 33410503 33413559 Gma13g01811 13 33410503 33413559 ECH
Gma15g00997 15 8377062 8380320 Gma13g01811 13 33410503 33413559 GST
Gma17g00137 17 1167214 1175885 Gma13g01811 13 33410503 33413559 PCT