Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01807 ATGCAAACTGTGGTGGAGCTTATTGTGTTGGTGCCCAATCACAAATCTCTTGAAGGATTTGTAATAAAGGGCCAGACCAGGCACCATCACCAAAGTTTGATTAAAATGGGTTGCTTCCCATGCTGTAAGTCAGAGGCTGAATCATCCTCTTCAAATGCATCCGCCGGAAAAATTTCCAAAGGAAGGAGAACATTCAAATCATTGGCTTCAGTTATGTCACATAAAACAGGTAGTAGCAGGCAAAGACGGATAGATGCAGAGATAAGAAAATATGGATCAGCAAAAAACGATGTCAAAGTATTCACATATGCACAACTTGCTGAAGCTACAAACAACTACAATTCTGATTGCCTGGTTGGCGAAGGTGGATTCGGGAATGTCTACAAAGGATTCTTAAAAAGTGTTGATCAAACTGTAGCTGTGAAGGTACTGAACAGGGAAGGAGCGCAAGGAACACGAGAATTTTTTGCAGAGATTTTGATGTTGAGCATGGTGCAACACCCAAATCTTGTGAAGCTCGTGGGTTATTGTGCAGAAGACCAACATAGGATTTTGGTTTATGAATTCATGTCCAATGGGAGTTTGGAAAATCACCTTTTAGACATAGGTGCAGATAAGGagcctatggattggaagaatagaatgaaaatagcagagggagcagctagaggacttgaatatttgcataacggtgcagatccagctattatataccgtgattttaaatcatctaatatactattagatgaaaattttaatccaaagctctctgattttggacttgctaagattggtccaaaagaaggtgaggagcatgtggcaactagggtgatggggacttttggttattgtgcaccagagtatgctgcttcgggtcagcttagcacaaagtcagatatttatagttttggggttgtgcttttggaaataatcacaggtaggagggtatttgacactgcaagaggcacagaagagcaaaacttgattgactggGCACAACCTTTGTTTAAGGACAGAACGAAGTTCACTCTAAtggctgatcctttgcttaaaggtcagttccctgtgaagggtctgtttcaagcccttgcagtagcagcaatgtgtctccaagaggaacctgacacacgaccttacatggacgacgttgtgacggctcttgcaCATCTAGCAGTGCACAGAGTTGAAGAAAAGGACATAGCTGGTGAATCTGTAATATGTGCCGGGCATGTTGAATCTTTTAGAGCTATAAGTTCAGCTGGATCTGGGAGGACGTAG 1278 0.252 MQTVVELIVLVPNHKSLEGFVIKGQTRHHHQSLIKMGCFPCCKSEAESSSSNASAGKISKGRRTFKSLASVMSHKTGSSRQRRIDAEIRKYGSAKNDVKVFTYAQLAEATNNYNSDCLVGEGGFGNVYKGFLKSVDQTVAVKVLNREGAQGTREFFAEILMLSMVQHPNLVKLVGYCAEDQHRILVYEFMSNGSLENHLLDIGADKEPMDWKNRMKIAEGAARGLEYLHNGADPAIIYRDFKSSNILLDENFNPKLSDFGLAKIGPKEGEEHVATRVMGTFGYCAPEYAASGQLSTKSDIYSFGVVLLEIITGRRVFDTARGTEEQNLIDWAQPLFKDRTKFTLMADPLLKGQFPVKGLFQALAVAAMCLQEEPDTRPYMDDVVTALAHLAVHRVEEKDIAGESVICAGHVESFRAISSAGSGRT 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01807 425 Gene3D Phosphorylase Kinase; domain 1 72 189 - -
Gma13g01807 425 CDD STKc_IRAK 119 387 - -
Gma13g01807 425 ProSiteProfiles Protein kinase domain profile. 113 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g01807 425 PANTHER OS07G0668900 PROTEIN 36 423 - -
Gma13g01807 425 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Gma13g01807 425 Pfam Protein kinase domain 115 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g01807 425 ProSitePatterns Protein kinases ATP-binding region signature. 119 142 IPR017441 GO:0005524
Gma13g01807 425 PANTHER RECEPTOR SERINE/THREONINE KINASE 36 423 - -
Gma13g01807 425 Gene3D Transferase(Phosphotransferase) domain 1 190 407 - -
Gma13g01807 425 SUPERFAMILY Protein kinase-like (PK-like) 97 385 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01807 Gma-Chr13 33369235 33371815 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01807 36 392 Glycoside Hydrolase AT3G07070 53.444 1.69e-136 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Gma13g01807 Pkinase 4.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01807 - - gmx:100305361 768.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01001 15 8427868 8429958 Gma13g01807 13 33369235 33371815 GST