Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01780 ATGTGTGCAATTTCAGCAGTTGTGTCCGTAACTGCTGCTGCCCCAATTGCACGCGTTAAACTCTTGATACAGAACCAGAATGAGATTATCAAAGTTGGTAGACTATATGAATCTTATAAGGGTATTGGAGATTGTTTTAAGAGAACAATTCAGGAGGAGGGTGTTTTTTCCCTGTGGAGAGGTAACACTGCAAGTGTCATCCGACATGTCCCTGCTCACGATAAGGATGGTTACTGGAAATGGTTTTTTGGCAACTTGGCCTCAGGAGGTGCTGCTGGTGCCTCATCCCTTTTGTTTATCTACTGCCTCGACTATGCCCGAACTGGTTTGGCTAATGATGTAAAGAAGGGTGGAGAAAGGCAATTCAATGGTCTTGTTGATGTTTACGGGAAGACATATGCATCTGATGGTATTGCTGGACTTTATCGTGGCTTCAACATTACTTGTGTTGGAGTCTTTGTGTACCGTGGTCTCTTCTTTGGATTGTATGATTCCCTGAGGCCAGCTCTCTTGGTTGGGAATTTTCAGCTTGGCTCTTTCGCTGACTTTAGCATAGCATTTCTCGCCTGCTGTAGTGCAAG 581 0.4458 MCAISAVVSVTAAAPIARVKLLIQNQNEIIKVGRLYESYKGIGDCFKRTIQEEGVFSLWRGNTASVIRHVPAHDKDGYWKWFFGNLASGGAAGASSLLFIYCLDYARTGLANDVKKGGERQFNGLVDVYGKTYASDGIAGLYRGFNITCVGVFVYRGLFFGLYDSLRPALLVGNFQLGSFADFSIAFLACCSA 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01780 193 PRINTS Adenine nucleotide translocator signature 127 140 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Gma13g01780 193 PRINTS Adenine nucleotide translocator signature 39 60 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Gma13g01780 193 Pfam Mitochondrial carrier protein 3 72 IPR018108 -
Gma13g01780 193 Pfam Mitochondrial carrier protein 79 170 IPR018108 -
Gma13g01780 193 PRINTS Mitochondrial carrier protein signature 95 113 IPR002067 GO:0055085
Gma13g01780 193 PRINTS Mitochondrial carrier protein signature 142 160 IPR002067 GO:0055085
Gma13g01780 193 PRINTS Mitochondrial carrier protein signature 11 25 IPR002067 GO:0055085
Gma13g01780 193 ProSiteProfiles Solute carrier (Solcar) repeat profile. 80 169 IPR018108 -
Gma13g01780 193 SUPERFAMILY Mitochondrial carrier 3 189 IPR023395 -
Gma13g01780 193 PANTHER ADP,ATP CARRIER PROTEIN 1, MITOCHONDRIAL-RELATED 1 190 - -
Gma13g01780 193 Gene3D Mitochondrial carrier domain 1 193 IPR023395 -
Gma13g01780 193 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 1 190 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01780 Gma-Chr13 33114134 33116183 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01780 1 193 Antiporters AT5G13490 64.186 9.04e-82 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01780 K05863 - gmx:100793257 260.381