Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01779 ATGGTTGATCAGGTTCAGCACCCTAGAATCATTGAGAAGGTTGCAGGCCAGCAGCATCTCCGTACTGGCCTTCCTTTGTACCACCAGTGGCGCTCGTTTGCTAATTACTCAAATGGTGCATTGCAGTATCCAGTGATGCCAGCATGCAGAGCTGCAACAGCAGCCTCCCATGTGTTTGTTGCAGCTCCTTCTGAGAAAGGACACTTCCTTATTGACTTTCTCATGGGTGGAGTTTCAGCTGCTGTGTCCAAAACTGCTGCTGCCCCCATTGAACGCGTTAAACTCTTGATCCAGAACCAGGATGAGATGATCAAAGCTGGTAGACTCTCTGAACCCTACAAGGGTATTGGTGATTGTTTTAAGAGAACAATGCAGGAGGAAGGTGTTGTTTCCCTGTGGAGAGGTAACACTGCAAATGTCATCCGTTATTTCCCTACTCAGGCCCTGAACTTTGCATTCAAGGACTACTTCAAGAGGCTTTTCAATTTCAGGAAGGACAGGGATGGTTACTGGAAATGGTTTGCTGGTAACTTGGGCTCAGGAGGTGCTGCTGGTGCCTCATCCCTTTTGTTTGTATACTCCCTTGACTATGCCCGTACTCGTTTGGCCAATGATGCTAAGGCTGCAAAGAAGGGTGGAGAAAGGCAATTCAATGGTCTTGTTGATGTCTACAAGAAGACATTGGCATCTGATGGTGTTGCTGGTCTGTACCGTGGCTTCAACATTTCCTGTGTTGGAATCATTGTGTACCGTGGTCTCTACTTTGGAATGTATGATTCCTTGAAGCCTGTTCTCCTAACTGGCTCTTTGCAGGATAGCTTTTTTGCTAGTTTTGGCCTTGGATGGCTCATCACCAATGGTGCAGGTTTAGCCTCATACCCAATTGACACTGTTAGAAGAAGAATGATGATGACATCTGGTGAAGCTGTGAAGTACAAGAGCTCTATGGATGCATTTACACAAATCCTCAAGAATGAGGGTGCCAAGTCCTTGTTTAAGGGAGCTGGTGCTAATATCCTCCGTGCTGTTGCTGGTGCTGGTGTGCTTGCTGGTTATGACAAGTTGCAGAGAGAGAGAAGCACACTGCACACCACATTGCCACATAACACAACATCGAAAccctctctccctctccctctcttcctctccctctcttccAACCATTCCGAATGTGAACAAGTTGTTGTTGTTGAACGACAAATGGGGGTGCATTACGTAGACGCTGGGTTCCCTTATGCTGTTAATGATAACTTCGTGGATTTTTTCCAAGGATTCACTCATGTGCCCGTCAATTATGCCTTTGCTGGCTCAATTCCTGATCAGGAAAGTGTCTACTGGTCAATGAACATGAATCCCTATAAGTTTGGATTGTCTGGTCCTGGGAGTACATCTTACTATAGTTCTTATGAGGTAAATGGTCATTTGCCGAGAATGGAGATAGATAGGGCTGAGTGGGAATACCCTTCGACAATTACCACTGTGGAAGAACCAGCTACAACAGATTCTCCACCTAGAAGAGATGGAGTCACGAGCATGCAGACCATCCCTGAAGAATGTTATCCAAATCATCATGAGTCCAACAGTAGTAGCCAGGTCATATGGCAAGACAACATCTATCCTGATGATATGACTTATGAGGAACTACTGGACCTGGGGGAGGCAGTTGGGACTCAAAGCCGAGGTCTTTCCCAAGAACTTATTGATATGCTTCCAACCTCAAAGTACAAATTTGGTAGTTTATTCAAGAGAAAAAATTCTGGGAAAAGGTGTGTAATTTGTCAGATGACATACAGAAGAGGTGACCAGCAAATGAAATTGCCATGCAGCCATGTCTATCATGGTGAATGCATCACCAAGTGGCTTAGCATTAACAAGAAATGTCCTGTTTGCAACACTGAGGTTTTTGGCGAGGAATCAACGCATTAG 1926 0.4429 MVDQVQHPRIIEKVAGQQHLRTGLPLYHQWRSFANYSNGALQYPVMPACRAATAASHVFVAAPSEKGHFLIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFKRTMQEEGVVSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFRKDRDGYWKWFAGNLGSGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYKKTLASDGVAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGSLQDSFFASFGLGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSMDAFTQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQRERSTLHTTLPHNTTSKPSLPLPLFLSLSSNHSECEQVVVVERQMGVHYVDAGFPYAVNDNFVDFFQGFTHVPVNYAFAGSIPDQESVYWSMNMNPYKFGLSGPGSTSYYSSYEVNGHLPRMEIDRAEWEYPSTITTVEEPATTDSPPRRDGVTSMQTIPEECYPNHHESNSSSQVIWQDNIYPDDMTYEELLDLGEAVGTQSRGLSQELIDMLPTSKYKFGSLFKRKNSGKRCVICQMTYRRGDQQMKLPCSHVYHGECITKWLSINKKCPVCNTEVFGEESTH 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01779 641 ProSiteProfiles Solute carrier (Solcar) repeat profile. 172 264 IPR018108 -
Gma13g01779 641 ProSiteProfiles Solute carrier (Solcar) repeat profile. 67 160 IPR018108 -
Gma13g01779 641 Pfam Ring finger domain 589 631 IPR001841 -
Gma13g01779 641 Pfam Mitochondrial carrier protein 171 267 IPR018108 -
Gma13g01779 641 Pfam Mitochondrial carrier protein 68 163 IPR018108 -
Gma13g01779 641 Pfam Mitochondrial carrier protein 273 356 IPR018108 -
Gma13g01779 641 SUPERFAMILY RING/U-box 589 635 - -
Gma13g01779 641 PRINTS Adenine nucleotide translocator signature 146 158 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Gma13g01779 641 PRINTS Adenine nucleotide translocator signature 113 134 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Gma13g01779 641 PRINTS Adenine nucleotide translocator signature 69 81 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Gma13g01779 641 PRINTS Adenine nucleotide translocator signature 277 293 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Gma13g01779 641 PRINTS Adenine nucleotide translocator signature 172 185 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Gma13g01779 641 SMART ring_2 590 630 IPR001841 -
Gma13g01779 641 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 2 356 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Gma13g01779 641 ProSiteProfiles Zinc finger RING-type profile. 590 631 IPR001841 -
Gma13g01779 641 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 552 635 IPR013083 -
Gma13g01779 641 SUPERFAMILY Mitochondrial carrier 68 354 IPR023395 -
Gma13g01779 641 ProSiteProfiles Solute carrier (Solcar) repeat profile. 272 358 IPR018108 -
Gma13g01779 641 PRINTS Mitochondrial carrier protein signature 187 205 IPR002067 GO:0055085
Gma13g01779 641 PRINTS Mitochondrial carrier protein signature 85 99 IPR002067 GO:0055085
Gma13g01779 641 PRINTS Mitochondrial carrier protein signature 237 255 IPR002067 GO:0055085
Gma13g01779 641 PRINTS Mitochondrial carrier protein signature 72 85 IPR002067 GO:0055085
Gma13g01779 641 PRINTS Mitochondrial carrier protein signature 135 155 IPR002067 GO:0055085
Gma13g01779 641 PRINTS Mitochondrial carrier protein signature 281 303 IPR002067 GO:0055085
Gma13g01779 641 Gene3D Mitochondrial carrier domain 70 359 IPR023395 -
Gma13g01779 641 PANTHER ADP,ATP CARRIER PROTEIN 1, MITOCHONDRIAL-LIKE 2 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01779 Gma-Chr13 33086530 33103058 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01779 1 356 Antiporters AT5G13490 79.570 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01779 K05863 - gmx:100793257 689.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g01779 13 33086530 33103058 Gma13g01779 13 33086530 33103058 ECH