Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01714 ATGGACCCTAATCCCCGCACTATCCGCAGCCTAGTCTCGAAGCTCAGCTCCGTCTCCGAAGCCGCCCGCATCGACGCCCTCTCCCAGCTCCGCCTCATGTCAAAACAATCCCCCGAAACGCGCCCCATCATCGCCCAAGCAGGCGCAATCCCCTACATCGCAGAAACCCTCTATTCCTCTTCTCACCCCTCCCAAGAAGACGCCGCTACCACACTCCTCAACCTCTCCATCACCCTAAAGGAGCCCCTCATGTCCACACGTGGCGTCCTCGACGCCATCGCCCACGTCATCTCTCACCACCACACCACCTCCTCTCCCCCTGCGGTTCAGTCCGCCGCCGCCACCATCCACAGCCTCCTCTCCTCGGTCGACTCCTACCGCCCCGTTGTCGGCTCCAAGCGCGAGATTGTCTACTCCCTCATCGACATCCTCCGCTGCCACCTCTCGTCTCCTCCCCGCACTATCAAGGATTCGTTAAAGGCGTTATTCGCCATCGCGCTTCATCCGATTAACAGATCTACGATGATTAACCTTGGTGCGGTTCCCGCGCTTTTTTCGCTGGTGTTGAAGGACGGTAGGGTTGGGATTGTGGAGGACGCGACGGCGGTGATCGCGCAGGTCGCGGGATGCGAGGACGCCGTGGATGCCTTTCGCAAGGCCTCCGGTGGTGTCGGCGTCCTTGCCGACCTCCTCGACCTCGCCACCGCCGCCAGCATGCGCACCAAGGAGAACGCCGTCTCGGCGCTGCTCAATTTGGTGCGGTGCGGGGGCGACAAGGTCGCCGCCGACGTGCGCGACGTCGTGGCGTTTGGAGCGCTAGATGGAATTGCGGATGTGAGGGATGGGGGTAGTGTAAAGGGGAAGAACAAGGCTGCTGAATTGATGAAGGTTTTGCTCGGTCAAAACAATGGCGATGTTGTTGTGTTTAACAGTGATACTTGTTCTTCGTTTGGTTCCACCAGGAATCATGATTCGGAATGA 981 0.5953 MDPNPRTIRSLVSKLSSVSEAARIDALSQLRLMSKQSPETRPIIAQAGAIPYIAETLYSSSHPSQEDAATTLLNLSITLKEPLMSTRGVLDAIAHVISHHHTTSSPPAVQSAAATIHSLLSSVDSYRPVVGSKREIVYSLIDILRCHLSSPPRTIKDSLKALFAIALHPINRSTMINLGAVPALFSLVLKDGRVGIVEDATAVIAQVAGCEDAVDAFRKASGGVGVLADLLDLATAASMRTKENAVSALLNLVRCGGDKVAADVRDVVAFGALDGIADVRDGGSVKGKNKAAELMKVLLGQNNGDVVVFNSDTCSSFGSTRNHDSE 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01714 326 PANTHER U BOX DOMAIN-CONTAINING 3 320 - -
Gma13g01714 326 Gene3D - 2 281 IPR011989 -
Gma13g01714 326 SUPERFAMILY ARM repeat 7 303 IPR016024 -
Gma13g01714 326 SMART arm_5 210 254 IPR000225 GO:0005515
Gma13g01714 326 SMART arm_5 37 77 IPR000225 GO:0005515
Gma13g01714 326 SMART arm_5 168 209 IPR000225 GO:0005515
Gma13g01714 326 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 3 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01714 Gma-Chr13 32295992 32297678 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01714 8 298 U-box Gene Family AT1G23030 32.765 2.52e-28 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01714 - - gmx:100819160 593.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g01714 13 32295992 32297678 Gma13g01714 13 32295992 32297678 ECH
Gma13g01714 13 32295992 32297678 Gma15g02256 15 47234138 47235115 GST