Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01712 ATGCGTCCCGATGAGGCCGATTGTATCTACTATTTGAGAACACGGGATTTTGCAGTTACGGCGCACGGTGTCGTTTCAACCATCCTTGTGACCGTGCCGTGGCAATTACTTCTTCTTAATTATCGTTTCGCAGGGTTTTGGCTTCGTTGCTTCCTCGTGTTATTGGAGCTGCGGCGAGGACTTGAGGAGACTTTCCAGAACGCGTGGGACAGCCTCTGTGCCAGAGCACTTGTTTTCTTTTCCACTAAGGATAACAGTATTTGGGATTTGTACCTGCAGATGAAAACTGCAGTGATGATATTGAGAAACCTGGAGGCACTTGAGCATATTATTAAAGCAGGATGGAGGATTTCTAAGTTCTTCTGTTTTGTACACGTTACCCAAACCTATCTGATCGCCCCTGCTGTGATCTATGGTCCTAGCATGCTTCCTACAATCGATTTGAAAACAGCTGTGTTCTTAATGGAAAAGATCTCACCCTGGTTTGGTAAAGTTGCTTGTGGAGATATTGTAGTCTTGCGCAATCCTCAAGACCCTAGGCGCTTCATGACCAAACGTGTGGTTGGATTGGAGGGTGATAGCATTACATACATTTCCAATCCTGAGACCTATGAATTGGAGGGTGATAGTTTTACACACATTTCCTCTCTTGATAACAGTGATAAGTCTAAGACTATTTTGGTGCATACAATTTCTTATAAAATTTAA 708 0.435 MRPDEADCIYYLRTRDFAVTAHGVVSTILVTVPWQLLLLNYRFAGFWLRCFLVLLELRRGLEETFQNAWDSLCARALVFFSTKDNSIWDLYLQMKTAVMILRNLEALEHIIKAGWRISKFFCFVHVTQTYLIAPAVIYGPSMLPTIDLKTAVFLMEKISPWFGKVACGDIVVLRNPQDPRRFMTKRVVGLEGDSITYISNPETYELEGDSFTHISSLDNSDKSKTILVHTISYKI 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01712 235 PANTHER PEPTIDASE S24/S26A/S26B/S26C FAMILY PROTEIN 99 229 - -
Gma13g01712 235 Pfam Signal peptidase, peptidase S26 120 199 IPR019533 GO:0004252|GO:0006465
Gma13g01712 235 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 99 229 - -
Gma13g01712 235 CDD S26_SPase_I 134 193 IPR019533 GO:0004252|GO:0006465
Gma13g01712 235 Gene3D Umud Fragment, subunit A 127 232 - -
Gma13g01712 235 TIGRFAM sigpep_I_bact: signal peptidase I 120 199 IPR000223 GO:0006508|GO:0008236|GO:0016020
Gma13g01712 235 SUPERFAMILY LexA/Signal peptidase 129 199 IPR036286 -
Gma13g01712 235 PRINTS Bacterial leader peptidase 1 (S26A) family signature 130 146 IPR000223 GO:0006508|GO:0008236|GO:0016020
Gma13g01712 235 PRINTS Bacterial leader peptidase 1 (S26A) family signature 183 195 IPR000223 GO:0006508|GO:0008236|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01712 Gma-Chr13 32279063 32280538 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01712 142 198 MADS-box Gene Family AT1G29960 43.860 1.02e-10 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01712 K09647 - gmx:100818627 273.478