Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01711 ATGCAAGCCAATACCTCGAATCTTCTTGACATTTATGTGAAATCAACAAAAGGAGAAGATGAAGATGTTATGATATCCGGCCAGGGCCCTCCTCCTCAACCGCGACCTCTCTTTTGCCAAGATCACTACTCCGCGCTGGGCGTTGGGCCCAGCAAGACAATCTCGGACGATCAGTCGTGGTTGAGATCCAAGTTCATGCTTAGAAGGGCAGCAGGAGGAGGGATTAGCTGTCAGAACTGCGGGAACCAAGCCAAGAAAGATTGCCCTCACATGTGGTGCAGGACGTGCTGCAAGAGCCGCGGCTTCGATTGCCAAACCCACGTCAAGAGCACTTGGGTCCCCGCATCACGCCTCCGCGAACGACTACAACAACTCTTTGCTTTGCAACAAACCCTCGAACCACCTTTTTCTGGAGGAGGCAAAACCCTAACCCTAAGAGGAAGGAGAGAAAAGGGATTACTAACATATCTGAGGGCCAGGGCTGCCGTCGCCGGTGAGAGAGTCGAAGTCAGTGCCAAAGAGGCGAGTGTTGCGGTTGGCGTCAGTGTCCTAGTGGAACCCGCGGCCCTTGGTCTTCTTCAGTCACCGCAGTTTCATCCTTGTTTTTGCTCATTGTTCGAGGTCGAGGGGTGTCGTGCGTGTGGATAA 648 0.5324 MQANTSNLLDIYVKSTKGEDEDVMISGQGPPPQPRPLFCQDHYSALGVGPSKTISDDQSWLRSKFMLRRAAGGGISCQNCGNQAKKDCPHMWCRTCCKSRGFDCQTHVKSTWVPASRLRERLQQLFALQQTLEPPFSGGGKTLTLRGRREKGLLTYLRARAAVAGERVEVSAKEASVAVGVSVLVEPAALGLLQSPQFHPCFCSLFEVEGCRACG 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01711 215 PANTHER TRANSCRIPTION FACTOR STY-LRP1 FAMILY-RELATED 24 141 - -
Gma13g01711 215 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 24 141 IPR007818 GO:0003700|GO:0006355
Gma13g01711 215 Pfam Domain of unknown function (DUF702) 74 135 - -
Gma13g01711 215 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 76 117 IPR006510 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01711 Gma-Chr13 32241365 32242587 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01711 73 130 C2H2 Transcription Factor Family AT1G75520 79.310 1.12e-28 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Gma13g01711 DUF702 6.9e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01711 - - gmx:100814589 189.504