Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01707 ATGCAACCCTTTAGCCGCTTGGTGGAACCCTTCAAAtatcatgtgtttcttagcttcagaggcaaagatacacgtttcacctttactggcaacctctaccgagctctccaagatcggggattccgcgtcttcatggatgatcagaaaattgacaaagggaagaaaatatctcaagaactccccaaggcgattaaggaatccaggatttatattatcgttttatctgagaattttgcttcttcctggtattgcttagttgaagttgttatgattcttgatgagttcgctaaggggaagggtagatggattgtgccgattttcttctacgtggatccctctgttctggttcgtacttatgaacaagcattggctgaccagaggaagtggtctagtgatgacaaaattgaagaatggaggactgctttgactaaaTTATCTAAATTTCCTGGCTTCTGTGTCAGCAGGGACGGGAATATATTTGAATACCAACATATTGATGAAATCGTTAAAGAGGTCTCTAGACATGTTATCTGCCCAATTGGACTTGATGAAAAAATATTTAAGGTTAAATTGCTTTTGTCCTCTGGATCAGatggagtccgcatgattgggatatgcggagaagctgggattggtaaaacaactttagcCCATGAAGTTTTTCACCACGCTGACAAGGGATTTGATCACTGTCTCCTCTTTTATGACGTGGGAGGAATTTCAAATCAGTCTGGAATTTTGTCAATACTCCATGGAAAAAGGGTTTTTATAATTTTTCAAGATATTAAACATTTCAAGCAGTTGGAAGACATTCGAGAACTAACTAAGCAgcttggttctggcagcaaagtcatcattacagctcaagataagcatttgcttgatagatatgggattGGATTTGAAAGTATATGTGAAATAAAAGGGTTTAGTGATTCAGAAGCTGATCGATTGCTTGAATTCAAAGTTCTTAATTCTGCAACTGTTAGTCCTAAGTATGTGAACATTCTAAACCGAATCAAGTCTTATGCCCTTGGTCATCCATGGACTTTGGAAGTAATGTGTTCCAACTTGAGTGGAAAATCAATAGAAGAATGTGAATCTGCATTACTCAAGTATGAATCTATAACAGATAGAGACATCCAAAAGATACTAGAAGTAAGCTTTATTGCTTTGGAAAAATGTCAGCAGCAGATGTTGATTCACATTGCATTGTACCTCAAAGACCAGAAATTGGTAGATGTTGAAGCTGAACTTTGTAATAAGTATAAAGTGTGCCCCAGATTAGATATTAGAGTGTTGCTTGATAAATCTCTTATAAAAATTAATCACCACGGTCAAGTGACATTGCATACCTCTACACAGGAAATGATTAAAGATAAAGCTTCACGTTTTGAGGAGCATGGAAACCAAGAAATGCAATTTGTCTTAAATGATGGAAGCGGGGATTGGGATCCGATGGAATTGGATTGA 1473 0.2349 MQPFSRLVEPFKYHVFLSFRGKDTRFTFTGNLYRALQDRGFRVFMDDQKIDKGKKISQELPKAIKESRIYIIVLSENFASSWYCLVEVVMILDEFAKGKGRWIVPIFFYVDPSVLVRTYEQALADQRKWSSDDKIEEWRTALTKLSKFPGFCVSRDGNIFEYQHIDEIVKEVSRHVICPIGLDEKIFKVKLLLSSGSDGVRMIGICGEAGIGKTTLAHEVFHHADKGFDHCLLFYDVGGISNQSGILSILHGKRVFIIFQDIKHFKQLEDIRELTKQLGSGSKVIITAQDKHLLDRYGIGFESICEIKGFSDSEADRLLEFKVLNSATVSPKYVNILNRIKSYALGHPWTLEVMCSNLSGKSIEECESALLKYESITDRDIQKILEVSFIALEKCQQQMLIHIALYLKDQKLVDVEAELCNKYKVCPRLDIRVLLDKSLIKINHHGQVTLHTSTQEMIKDKASRFEEHGNQEMQFVLNDGSGDWDPMELD 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01707 490 ProSiteProfiles TIR domain profile. 11 176 IPR000157 GO:0007165
Gma13g01707 490 SMART till_3 12 148 IPR000157 GO:0007165
Gma13g01707 490 SUPERFAMILY "Winged helix" DNA-binding domain 380 452 IPR036390 -
Gma13g01707 490 Gene3D - 10 171 IPR035897 -
Gma13g01707 490 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 402 IPR027417 -
Gma13g01707 490 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 10 463 - -
Gma13g01707 490 Pfam TIR domain 12 176 IPR000157 GO:0007165
Gma13g01707 490 Gene3D - 172 252 IPR027417 -
Gma13g01707 490 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 10 463 IPR044974 GO:0006952
Gma13g01707 490 Pfam NB-ARC domain 243 365 IPR002182 GO:0043531
Gma13g01707 490 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 150 IPR035897 -
Gma13g01707 490 PRINTS Disease resistance protein signature 202 217 - -
Gma13g01707 490 PRINTS Disease resistance protein signature 344 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01707 Gma-Chr13 32195670 32197774 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01707 2 463 WRKY Transcription Factor Family AT4G12020 23.425 8.97e-21 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01707 - - gmx:106795499 987.638