Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01706 ATGGTAACCTTCAATCTTTCCGTCGAGCCGAAACCCTTCACCAATGACGTGGTGATCATCTCCGATAAAGACACCCGGTGGGGTTTTGGGGGCACTCTCCTCAAAGCTTTTCAACTGTGTGGTTTCCGTGCAGTCTTAGTCGGGGCTGGTAATGAGCTAGGAAGAaaggaaattgaagaatccatggttgttattcctgtcttctccatggaccttgtatcctctccagatcacttggaggaacttgccacggtggttgatgagaagaggatgtgtcaaatgtttctgccttttctttacaagctggaactcaaagatgtgcgatatctgatgggtggAAAACTGTTTGAGAAATTTTACGAGGTTCTGACTAAAGTGACTGATTTGACTGGCTTTCGTTTCGGggatggagttacatatgaataccagtgtgtcgaaaagattgttcaagtgagcgctaaacacgctgcttccacgattggagtaattcctcgagtgacggaagcgatgttgcttttgtctcccgaatctgacaatggagtcaacgtggttggagttgttggaccaggaaaggaaacaataactcgtaaggtttatgaggtaattgccccaagttttcctgctcattgctttcttcctgatgtgggagaaaaaattagggaacatgggccggaatatctccaaaacatgcttgggccttatatgcttggaaattcccaggaaggagtgccatttataaggcatgagaaggttcttgcagttttggattgcattgactctctggattcgttgaaagctgctcttggacttactcctcgctttgctcctggaagtcaagtcttcattatagctccagatataactttgcttgaaaataatggaattgaaaaggtatatgaagtaaaggggttagacaagacatcggcttatcaagtgctttgcctagaggctttcagttccatgaatatgagtttcaaatacatggacatcataagccgtgctgaaacttgtgctgatggcaatccttgtgctttgaaagctattggttccagttttcgtggaaaaacaatagcggaatgcgagattgcattagatgaatataaaagaattcATTATTCTGAATTGATAGAGAGCATGATTGGAGAAAACAATTGGATCCCATCGTTCGGGGATATTTCAGAAGAGTATACGGAGTATGacatgccagatgtcgaactagcctcagatgatggaagcgggatggggaattttctgggatcctctaccctcttgttcctctgccctcttgtccAAGGTGTTCTAATCTCAAATACGCTGGTAGATGGACTCAATTTCATGGTAACAATATTGCAGGTCTACACTCCCGGCGGTAAAAAATGA 1380 0.129 MVTFNLSVEPKPFTNDVVIISDKDTRWGFGGTLLKAFQLCGFRAVLVGAGNELGRKEIEESMVVIPVFSMDLVSSPDHLEELATVVDEKRMCQMFLPFLYKLELKDVRYLMGGKLFEKFYEVLTKVTDLTGFRFGDGVTYEYQCVEKIVQVSAKHAASTIGVIPRVTEAMLLLSPESDNGVNVVGVVGPGKETITRKVYEVIAPSFPAHCFLPDVGEKIREHGPEYLQNMLGPYMLGNSQEGVPFIRHEKVLAVLDCIDSLDSLKAALGLTPRFAPGSQVFIIAPDITLLENNGIEKVYEVKGLDKTSAYQVLCLEAFSSMNMSFKYMDIISRAETCADGNPCALKAIGSSFRGKTIAECEIALDEYKRIHYSELIESMIGENNWIPSFGDISEEYTEYDMPDVELASDDGSGMGNFLGSSTLLFLCPLVQGVLISNTLVDGLNFMVTILQVYTPGGKK 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01706 459 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 23 375 - -
Gma13g01706 459 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 23 375 IPR044974 GO:0006952
Gma13g01706 459 PRINTS Disease resistance protein signature 338 352 - -
Gma13g01706 459 PRINTS Disease resistance protein signature 180 195 - -
Gma13g01706 459 PRINTS Disease resistance protein signature 245 259 - -
Gma13g01706 459 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 165 376 IPR027417 -
Gma13g01706 459 Gene3D - 13 160 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01706 Gma-Chr13 32128371 32137602 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01706 168 368 WRKY Transcription Factor Family AT5G45050 27.778 1.37e-12 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01706 - - gmx:100781554 835.099