Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01702 atggggagtagaactacctggagggttgttggtgttgaagatgacaagggagctgaaagaggaatgccgagcttcaattctgagttacccaattccaattcatgCTATACAGAGGGGAACACAATTGATTCTTTTCGTGTTTCTGACTTTGGAGCATTTGATCAGTCATATCACATAGAGGATGCTGTTGACCTCAGTGGAAACCCAGTTTACAATTCACTAAAGGTAAATAGCCAAACAATTTCTCCGGGTTCTGTTCACATTAGTAGCCTTGGTCAGTTGCCAATTTCACTCGAAAAAAGCCCATTGACAAATCAAACAGAGCCACCGCATAGGTTGCGATTACAGAAGGTTCAATCATCAAATCCTGGCACAATATTAGTTGGTAATACAGATAACTGGGAGGAGTCTACCATGGCTGATGCCAGTCCCAGGACTGATATTTCTACAGATGGTGACACTGATGACAAGAATCATCCGTTTGATAGAAATCAAGCCCTTACTGCTGTTTCCGACTCTAGTGACAGATCGAAAGATAAATCAGATCAGAAGACTCTCCGCAGGCTTGCTCAGAACCGTGAAGCTGCCAGAAAAAGCCGCTTGCGAAAGAAAGCGTATGTCCAACAGTTGGAAAGTAGTCGTTTGAAGCTGACCCAACTAGAGCAAGAGCTTCAGCGAGCTAGGCAGCAGGGGATTTTCATATCAAGCTCGGGTGATCAAGCACATACATTGAGTGGAAATGGGGCAATGCAATTTGATGCAGAATATGCTAGGTGGCTGGAAGAGCAGAATCGACAAATTAATGAGCTAAGAGCAGCTGTAAACTCTCATGCAAGTGACACTGAACTTCGCATGATTGTTGATGGTATATTGGCACATTATGATGAGATTTTTAGGCTGAAAGGTGTTGCAGCTAAGGCTGATGTTTTCCATTTGCTGTCTGGCATGTGGAAAACACCTGCTGAGAGGTGTTTTTTGTGGCTTGGTGGTTTTCGGTCATCTGAACTTCTCAAGCTGCTGGTAAGTCAATTGGAGCCTCTCACAGAGCAGCAGCTGATGGGTATCACCAACTTGCAGCAATCCTCTCAACAAGCAGAAGATGCGTTGTCTCAGGGCATGGAAGCATTGCAACAGTCCCTTGCAGAGACTTTGTCCACCGGAGCACCTGCCTCATCTGGTTCATCAGGGAATGTGGCAAGTTACATGGGTCAAATGGCCATGGCCATGGGCAAGCTAGGGACACTAGAAGGGTTCATTCAACAGGCTGACAATCTTCGCCAGCAAACTCTTCAACAAATGCACCGTATACTGACAACTCGCCAATCAGCTCGCGCACTCCTTGCTATACATGACTACATTTCGCGTCTGCGTGCTCTCAGTTCGCTTTGGCTTGCTCGCCCTAGAGATTGA 1410 0.4255 MGSRTTWRVVGVEDDKGAERGMPSFNSELPNSNSCYTEGNTIDSFRVSDFGAFDQSYHIEDAVDLSGNPVYNSLKVNSQTISPGSVHISSLGQLPISLEKSPLTNQTEPPHRLRLQKVQSSNPGTILVGNTDNWEESTMADASPRTDISTDGDTDDKNHPFDRNQALTAVSDSSDRSKDKSDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSSGDQAHTLSGNGAMQFDAEYARWLEEQNRQINELRAAVNSHASDTELRMIVDGILAHYDEIFRLKGVAAKADVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLVSQLEPLTEQQLMGITNLQQSSQQAEDALSQGMEALQQSLAETLSTGAPASSGSSGNVASYMGQMAMAMGKLGTLEGFIQQADNLRQQTLQQMHRILTTRQSARALLAIHDYISRLRALSSLWLARPRD 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01702 469 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 187 202 IPR004827 GO:0003700|GO:0006355
Gma13g01702 469 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 182 226 IPR004827 GO:0003700|GO:0006355
Gma13g01702 469 Pfam Basic region leucine zipper 180 226 IPR004827 GO:0003700|GO:0006355
Gma13g01702 469 PANTHER TRANSCRIPTION FACTOR TGA9 61 469 - -
Gma13g01702 469 MobiDBLite consensus disorder prediction 148 162 - -
Gma13g01702 469 Coils Coil 260 280 - -
Gma13g01702 469 Pfam Seed dormancy control 266 342 IPR025422 GO:0006351|GO:0043565
Gma13g01702 469 MobiDBLite consensus disorder prediction 115 186 - -
Gma13g01702 469 PANTHER TRANSCRIPTION FACTOR TGA2.3-LIKE ISOFORM X1 61 469 - -
Gma13g01702 469 ProSiteProfiles DOG1 domain profile. 249 466 IPR025422 GO:0006351|GO:0043565
Gma13g01702 469 Coils Coil 203 230 - -
Gma13g01702 469 CDD bZIP_HBP1b-like 184 236 - -
Gma13g01702 469 SMART brlzneu 180 243 IPR004827 GO:0003700|GO:0006355
Gma13g01702 469 Gene3D - 183 234 - -
Gma13g01702 469 MobiDBLite consensus disorder prediction 115 147 - -
Gma13g01702 469 SUPERFAMILY Leucine zipper domain 184 227 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01702 Gma-Chr13 32031803 32044213 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01702 139 469 bZIP Transcription Factor Family AT3G12250 79.758 0.0 528
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma13g01702 DOG1 5.2e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01702 K14431 - gmx:778190 879.782
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g01702 13 32031803 32044213 Gma13g01702 13 32031803 32044213 ECH
Gma13g01702 13 32031803 32044213 Gma15g02241 15 46994339 47001921 GST