Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01700 ATGACGGAGGAAGTTCCTGGGATTGTAGAAGCTGCTGAACCTCCAACATCATCACAATCACCTGCTGATGTGCCACATAATTTGGAAACAGAACAAATGACTCCTACAAAGTATTCTATTATCAGTAGGAATGGGGTTGGGACCACAGGAAAACACATACCTTTACTTGTGAATCTCTTTGAAGTTGCTGTTAATGTTCCAGACACAGTATTTTTTCAGTATAGTGTTGCTATTACTTTCGAAGATAAACAAGCTGTTGAAAGCAAGGGCATTGGGAGAAAAGTGATTGATAGGCTTTACCAAACATACTCTTCTGAACTTGGTGGCAAAAGGTTTGTATATGATGGAGGGAAAACTTTGTACACAGTGGGTCCTCTGCCACTAAATAAGTACGAGTTCAAAGTGTTGCTGGAGAAATCATTTACAAAACGTGCCAAGAGTCCTGGTGCTAATGGAAGCCTTCATGAGGAAACTAAAAGGTCAAAACATTCATTTCAGTCAAAGACATTCATGGTGGAGATAAGTTTTGCTACCAAAATACCACTTCAGTCCATTGTTATTTCCTTGAAAGAGGTTGAGTCGGATACCAATTCTCAAGATGCTTTGAGAGTGCTTGATACTATACTGAGGCAGCGTGCAGCTAACTGTGGGTGTCTCTTGGTAAGGCAATCTTTTTTTCATGATGACTCAAGAAATTTCAATGATGTTGGGGCTGGTGTAACAGCAGTCTCAGGTTTTCATTCCAGTTTTCGTTCCACACAGCGAGGATTGTCTCTCAATATTGACGTGTCAACAACTATTATCATAAAACCTGGACCTGTAATTGATTTTCTGTTATCAAATCAGCAAGTGAAGGAACCCCGTTATATTGACTGGGAAAAGGCGAAAAAAATGCTTAAAAATTTAAGGGTGCAAGCAACTCATCATAACCAGGAATTTAAAATTTCTGGGTTGAGTGAGAAACCATGCATTCAGCAACTTTTTAGTATGAAGGTTAAAAATGATGACAACAATAGCAGAGGGCAGACAGTGGATATTACTGTTTATGAATATTTTGCCAAACACTGTGGCATAGAGTTGACCTCATCTGCTTATCTTCCATGTCTTGATGTTGGGAAACCAAAACGTCCCGTCTATCTTCCCTTGGAGCTATGTTCACTTGTTTCCCTCCAACGGTATACAAAGGTTTTATCTCTGATGCAAAGAGCATCTTTAGTTGAAAAATCACGCCAAAAGCCTCAAGATAGAATCAAAATTTTAAAAAGTGCTGTAGGAAAATGCTATGATGATGATCCTGTTCTTGCTGCATGTGGCATTTCTATTGAGAAACAACTGAATCTGATTGAAGGTCGTGTTCTTGAAACACCAAAGTTGAAGGTTGGTAAGAATGATGATTGCATCCCCCATAACGGAAGGTGGAATTTTAATAAGAAGACACTTCTACAAGCATCACATATTGATTATTGGGCTGTTGTCAACTTTTCTGCAAGTTGTGATACTAGTTACATATCAAGGGAGCTGATCAGATGTGGAATGAGCAAGGGCATTAACATTGAACGGCCATATACTTTGATAGAGGAGGAACCACAGTTGAGAAAATCTCACCCTGTTGCAAGGGTTGAAAGAATGTTTGACCTGCTTGCATCAAAACTGAATAGAGAGCCAAAGTTGATTCTTTGTGTCTTGCCAGAGAGGAAAATTTGTGATATATATGGGCCTTGGAAAAAGAAGTGTCTGAGTGAAATTGGTGTTGTCACACAGTGCATTGCCCCTGTCAAGATCACTAATCAATACCTTACTAATGTTCTTCTTAAAATCAATTCTAAGCTTGGAGGAATAAATTCTCTGTTGGCAATAGAGCATTCTGGGCATCTTCCCCTGATTAAAGATACCCCAACGATGATTTTGGGGATGGATGTCTCTCACAATTCACTTGGTCGATTAGATAGTCCATCAATAGCAGCTGTTGTTGGATCTCGACATTGGCCACTGATTTCAAGGTATAGAGCGTCTGTGAGAATGCAGGCATCCAAGGTGGAGATGATTGATGCTCTATACAAGCCATTGGAAAATGGGAGTGATGATGGTATTATCAGAGAATTGCTTTTAGATTTCTATGATTCTAGTAATGGACGCAAGCCAACTCAATTTATTGTATTCAGGGATGGAGTTAGTGAATCACAATTCGAACAAGTTTTAACTATCGAGCTTAACCAGATAATCAAGGCCTATCAACATCTTGGTGAGGTTAATGTTCCCCAGTTCACTGTGATTGTGGCACAAAAAAAGCATCATATTAAGCTGTTTCTGCCTAATGGCCCAGAAAATGTTCCTCCTGGGACGGTTGTGGATACAACAATTACGCATCCAAGAAATTATGATTTTTACATGTGTGCTCATGCAGGGATGCTTGGAACATCCAGGCCTGTACATTATCATGTGCTACTTGATGAGATTGGTTTCTCGGCAGATGGCTTGCAAAATTTGATCCATTCGTTGTCCTATGTGTATGCATTCTTCCTTTTTGTTTATACAAAGTTTCACTACCCCTGGCTTATGCATGTATATACGTATTTCAGGAACCAAAGGAGCACAATTGCAACCTCAGTTGTGGCACCCATATGCTATGCTCACCATGCTGCAGCTCAGATGGGACAACTTTTGAATTTTGATGATTCATCAGAAACAGGTTCAAGTCCTGCTTCAGAGGGAGGCATCCCCATCCCAGAGCTTCCAAGGTTGCACAGGAATGTCAGGAGTTCCATGTTCTTCTGTTGA 2778 0.401 MTEEVPGIVEAAEPPTSSQSPADVPHNLETEQMTPTKYSIISRNGVGTTGKHIPLLVNLFEVAVNVPDTVFFQYSVAITFEDKQAVESKGIGRKVIDRLYQTYSSELGGKRFVYDGGKTLYTVGPLPLNKYEFKVLLEKSFTKRAKSPGANGSLHEETKRSKHSFQSKTFMVEISFATKIPLQSIVISLKEVESDTNSQDALRVLDTILRQRAANCGCLLVRQSFFHDDSRNFNDVGAGVTAVSGFHSSFRSTQRGLSLNIDVSTTIIIKPGPVIDFLLSNQQVKEPRYIDWEKAKKMLKNLRVQATHHNQEFKISGLSEKPCIQQLFSMKVKNDDNNSRGQTVDITVYEYFAKHCGIELTSSAYLPCLDVGKPKRPVYLPLELCSLVSLQRYTKVLSLMQRASLVEKSRQKPQDRIKILKSAVGKCYDDDPVLAACGISIEKQLNLIEGRVLETPKLKVGKNDDCIPHNGRWNFNKKTLLQASHIDYWAVVNFSASCDTSYISRELIRCGMSKGINIERPYTLIEEEPQLRKSHPVARVERMFDLLASKLNREPKLILCVLPERKICDIYGPWKKKCLSEIGVVTQCIAPVKITNQYLTNVLLKINSKLGGINSLLAIEHSGHLPLIKDTPTMILGMDVSHNSLGRLDSPSIAAVVGSRHWPLISRYRASVRMQASKVEMIDALYKPLENGSDDGIIRELLLDFYDSSNGRKPTQFIVFRDGVSESQFEQVLTIELNQIIKAYQHLGEVNVPQFTVIVAQKKHHIKLFLPNGPENVPPGTVVDTTITHPRNYDFYMCAHAGMLGTSRPVHYHVLLDEIGFSADGLQNLIHSLSYVYAFFLFVYTKFHYPWLMHVYTYFRNQRSTIATSVVAPICYAHHAAAQMGQLLNFDDSSETGSSPASEGGIPIPELPRLHRNVRSSMFFC 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01700 925 Pfam PAZ domain 275 405 IPR003100 GO:0005515
Gma13g01700 925 Pfam Argonaute linker 1 domain 221 270 IPR014811 -
Gma13g01700 925 Gene3D - 624 925 IPR036397 GO:0003676
Gma13g01700 925 Gene3D - 452 618 - -
Gma13g01700 925 SUPERFAMILY Ribonuclease H-like 541 889 IPR012337 -
Gma13g01700 925 Gene3D paz domain 265 393 - -
Gma13g01700 925 CDD Piwi_ago-like 432 883 IPR045246 -
Gma13g01700 925 PANTHER PROTEIN ARGONAUTE 6 852 924 - -
Gma13g01700 925 Pfam Piwi domain 557 838 IPR003165 GO:0003676
Gma13g01700 925 Pfam N-terminal domain of argonaute 51 209 IPR032474 -
Gma13g01700 925 SMART DUF1785_2 219 271 IPR014811 -
Gma13g01700 925 CDD PAZ_argonaute_like 271 388 - -
Gma13g01700 925 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 852 924 - -
Gma13g01700 925 PANTHER PROTEIN ARGONAUTE 6 32 837 - -
Gma13g01700 925 SUPERFAMILY PAZ domain 266 424 IPR036085 GO:0005515
Gma13g01700 925 ProSiteProfiles Piwi domain profile. 557 889 IPR003165 GO:0003676
Gma13g01700 925 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 32 837 - -
Gma13g01700 925 MobiDBLite consensus disorder prediction 13 34 - -
Gma13g01700 925 SMART Piwi_a_2 557 889 IPR003165 GO:0003676
Gma13g01700 925 MobiDBLite consensus disorder prediction 1 34 - -
Gma13g01700 925 ProSiteProfiles PAZ domain profile. 296 389 IPR003100 GO:0005515
Gma13g01700 925 SMART PAZ_2_a_3 272 414 IPR003100 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01700 Gma-Chr13 32002412 32010005 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01700 43 925 Eukaryotic Initiation Factors Gene Family AT5G43810 34.848 4.00e-154 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01700 K11593 - gmx:100778875 1783.84