LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma13g01681	ATGCTTCCTACTATCGATTTGAAAACAGGTGTGTTCTTAATGGAAAAGATCTCACCCCGGTTTGGTAAAGTTACTTGTGGAGATATTGTAGTCTTGCGCAATCCTCAACACCCTAGGCACTTTATGACCAAACGTGTGGTTGGATTGGAGGGTGATAGCGTTACATACATTTCCAATCCTGAGACCAATGAATATGAGGGTGATAGTTTTACACACATTTCCTCTCCTGATAACGGTGATAAGTCTAAGACGATTGTGGTGCCAAAGGGTGCCGTTTGGGTTGAGGGAGATAACAAGTATAACAGCAATGATTCAAGAAAATTTGGTCCTGTTCCTTATGACCTTATTGATGGCAAGATGTTCTGGAGGATAACGCCACTTAAAAAATTTGGACCTTTCTGGAATAAATGA	411	0.4088	MLPTIDLKTGVFLMEKISPRFGKVTCGDIVVLRNPQHPRHFMTKRVVGLEGDSVTYISNPETNEYEGDSFTHISSPDNGDKSKTIVVPKGAVWVEGDNKYNSNDSRKFGPVPYDLIDGKMFWRITPLKKFGPFWNK	136

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma13g01681	136	SUPERFAMILY	LexA/Signal peptidase	1	134	IPR036286	-
	Gma13g01681	136	ProSitePatterns	Signal peptidases I signature 3.	92	105	IPR019758	GO:0004252\|GO:0016021
	Gma13g01681	136	TIGRFAM	sigpep_I_bact: signal peptidase I	1	127	IPR000223	GO:0006508\|GO:0008236\|GO:0016020
	Gma13g01681	136	PRINTS	Bacterial leader peptidase 1 (S26A) family signature	42	54	IPR000223	GO:0006508\|GO:0008236\|GO:0016020
	Gma13g01681	136	PRINTS	Bacterial leader peptidase 1 (S26A) family signature	87	106	IPR000223	GO:0006508\|GO:0008236\|GO:0016020
	Gma13g01681	136	PANTHER	PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED	1	135	-	-
	Gma13g01681	136	PANTHER	PEPTIDASE S24/S26A/S26B/S26C FAMILY PROTEIN	1	135	-	-
	Gma13g01681	136	Pfam	Signal peptidase, peptidase S26	10	123	IPR019533	GO:0004252\|GO:0006465
	Gma13g01681	136	CDD	S26_SPase_I	1	119	IPR019533	GO:0004252\|GO:0006465
	Gma13g01681	136	Gene3D	Umud Fragment, subunit A	1	135	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma13g01681	Gma-Chr13	31786697	31789453	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma13g01681	1	133	MADS-box Gene Family	AT1G29960	42.857	1.98e-33	112

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma13g01681	K09647		-	gmx:100526949	288.115