Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01679 ATGCTTCATTCAATCGATTTGAAAACAGGTGTGTTCTTAATGGAAAAGATCTCACCCCGTTTTGGTAAAGTTGCTTGTGGAGATATTGTAGTCTTGCTCAATCCTCAACACCCTAGGCACTTTATGACCAAACGTGTGGTTGGATTGGAGGGTGATAGCGTTACATACATTTCCAATCCTGAGACCTATGAATATGAGGGTGATAGTTTTACACGCATTTCCTCTCCTGATAACGGTGATAAGTCTAAGACGATTGTG 258 0.4109 MLHSIDLKTGVFLMEKISPRFGKVACGDIVVLLNPQHPRHFMTKRVVGLEGDSVTYISNPETYEYEGDSFTRISSPDNGDKSKTIV 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01679 86 CDD S26_SPase_I 7 52 IPR019533 GO:0004252|GO:0006465
Gma13g01679 86 Pfam Signal peptidase, peptidase S26 11 56 IPR019533 GO:0004252|GO:0006465
Gma13g01679 86 Gene3D Umud Fragment, subunit A 1 85 - -
Gma13g01679 86 MobiDBLite consensus disorder prediction 67 86 - -
Gma13g01679 86 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 1 86 - -
Gma13g01679 86 SUPERFAMILY LexA/Signal peptidase 13 58 IPR036286 -
Gma13g01679 86 PANTHER PEPTIDASE S24/S26A/S26B/S26C FAMILY PROTEIN 1 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01679 Gma-Chr13 31761840 31762097 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01679 11 57 MADS-box Gene Family AT1G29960 44.681 1.70e-09 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01679 K09647 - gmx:100805997 164.851