Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01634 ATGTATAACCATAAATCTAGATTAGATTTTGCAATTGCTTTGGAGGCTTGTGTGTCTGAAGGCATTGGAAAAAGTTTCTGTGTTGGGGACACTGACCCACTTGATGTTGCGGCAATCAATAGTTTGTACGTGGCTCTTGGCTCACCACTCCTTGAGGGATGGAAAGCCACAGGAGGAGATCCTTGTTTGGAGCAATGGGAAGGTGTGAGTTGTGTCTTCTCCAACATTACTGCATTACGGCTGGGAGGCATGGATTTAAGTGGAAAGCTGGGAACTAATTTGGATTTCCCATCCATCATAGAAATGGATCTTAGCAACAACCAGATTGGAGGGACCATTCCATTCACTTTGCCCCCTACTTTGAGGAACTTGTCACTATCATCAAATCAGTTAAATGGAAGCATTCCAGATGCCTTATCCTTGTTAACTCAATTGTCAGACTTGTCATTAAAAGATAACCATCTGAATGGACAAATCCCAAATGCATTTCTAGAACTCACTGGTTTGATGAATTTGGATCTGTCTGGCAACAACTTGAGTGGTAAGCTGCCGCCCTCAATGGGAAATTTGTCTTCTCTTATCACACTAAACTTGCAGAACAATCAACTTTCTGGGACCCTTTTTGTTTTGCAGGACCTCCCTCTTCAGGATCTGAACATAGAGAACAATATATTCTCTGGGCCAATTCCCCCAGAGTTGTTGAGTATCCCTAATTTCAGAAAAGATGGAAATCCATTTAATACTACTATCATTCCATCACCTCCAGCTGCTTTCCCAGCACCTGCTGCTATGGCTCCTTCCCCAGAAAAATCACCTTGGAAAATGGCACATAATCCCTCTGATACCATAAAAGCACCAATACCTGCAATTGCTGGGAGATCTTTCAAAACTACAAAATTAGTTTGGATTGTTGGTGCAGGCTTTTTGATATTTATTGCATTAGGAGTCTGTCTTCTAATGCTGTGGTGCTTTAAGAGAAGACAGGAAAACAAGAAATATAAGAAACACAACACGAATATGTATACAAGATCTTTGCATAAACGTACATGCAGTAACTCCCCTTTTGAAGCAACTAATGATGAGGAGAAAGAATGGAGTTCCAAACTTCCACCCCTGCAGCCAGCACCACCACATCATATCCCAATCATTCCTGGAGAGAATTTAATAATCAATCCAGCTATATCTACCCAAGCAGCTGAAAGACAAATTGTCACAAATTCCATTAAAGTTTATACTGTTGCATCACTTCAGCAGTACACAAATAGTTTTTCCCAAGAAAATTATATTGGGGAAGGCATGCTTGGCCCTGTTTACAGGGCTGAACTCCCTGATGGAAAGTTACTGGCAGTTAGGAAGATGAATACTACTGCTTCTATGGGGCAAAATCATGAACAGTTTCTTCAATTAGTTTTCAGTATCTCCAAAATTCAACATGCTAATATTGTTAAGCTTATGGGCTACTGTGCTGAGTATAGTCAACGACTACTTGTACATGAGTATTGCAATAATGGTACCCTACATGAAGCATTGCATACAGATGATAAACTTCAGATTAAACTTTCATGGGATGATCGCATTCAGGTGTCACTTGGAGCTGCAAGAGCTTTGGAGTACTTGCATGAGCACTGTCAACCACCTATTGTGCACCGAAACTTTAGGTCTGCTAATATACTCCTCAATGACAAATTGGAAGTGCTTGTCTCTGATTGTGGATTAGGTTCTTTACTATCTTCAGGCTCTGCTAGTCAGTTGTTGGGACGCCACCTCACAGCTAATGGTTACAGTGCTCCAGAATTTGAGTATGGAAGTTATACATTGCaaagtgatgtctttagctttggagttgtaatgctagaactcctcactggacgaaaatcCTTTGACAGCTCACGGCCTCGTGTAGAGCAATTTTTGATGAGATGGGCAATCCCTCAACTCCATGACATAGATGCATTGTCAAAAATGGTTGACCCCTCCTTGAATGGAGAATATCCTAAGAAATCCTTGTCGCGTTTTGCAGACATTATTTCTTCATGTATTCAGAATGAACCTGAATTTCGACCAGCAATGTCAGAAATTGTTCAGGATCTCTTGCGAATGATGTAG 2106 0.3989 MYNHKSRLDFAIALEACVSEGIGKSFCVGDTDPLDVAAINSLYVALGSPLLEGWKATGGDPCLEQWEGVSCVFSNITALRLGGMDLSGKLGTNLDFPSIIEMDLSNNQIGGTIPFTLPPTLRNLSLSSNQLNGSIPDALSLLTQLSDLSLKDNHLNGQIPNAFLELTGLMNLDLSGNNLSGKLPPSMGNLSSLITLNLQNNQLSGTLFVLQDLPLQDLNIENNIFSGPIPPELLSIPNFRKDGNPFNTTIIPSPPAAFPAPAAMAPSPEKSPWKMAHNPSDTIKAPIPAIAGRSFKTTKLVWIVGAGFLIFIALGVCLLMLWCFKRRQENKKYKKHNTNMYTRSLHKRTCSNSPFEATNDEEKEWSSKLPPLQPAPPHHIPIIPGENLIINPAISTQAAERQIVTNSIKVYTVASLQQYTNSFSQENYIGEGMLGPVYRAELPDGKLLAVRKMNTTASMGQNHEQFLQLVFSISKIQHANIVKLMGYCAEYSQRLLVHEYCNNGTLHEALHTDDKLQIKLSWDDRIQVSLGAARALEYLHEHCQPPIVHRNFRSANILLNDKLEVLVSDCGLGSLLSSGSASQLLGRHLTANGYSAPEFEYGSYTLQSDVFSFGVVMLELLTGRKSFDSSRPRVEQFLMRWAIPQLHDIDALSKMVDPSLNGEYPKKSLSRFADIISSCIQNEPEFRPAMSEIVQDLLRMM 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01634 701 SUPERFAMILY L domain-like 35 238 - -
Gma13g01634 701 SUPERFAMILY Protein kinase-like (PK-like) 404 697 IPR011009 -
Gma13g01634 701 Pfam Leucine rich repeat N-terminal domain 35 71 IPR013210 -
Gma13g01634 701 Gene3D Ribonuclease Inhibitor 37 253 IPR032675 -
Gma13g01634 701 Gene3D Transferase(Phosphotransferase) domain 1 501 700 - -
Gma13g01634 701 Gene3D Phosphorylase Kinase; domain 1 388 500 - -
Gma13g01634 701 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 3-LIKE ISOFORM X1 397 701 - -
Gma13g01634 701 Pfam Protein tyrosine and serine/threonine kinase 426 697 IPR001245 GO:0004672|GO:0006468
Gma13g01634 701 ProSiteProfiles Protein kinase domain profile. 423 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g01634 701 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 3-LIKE ISOFORM X1 26 341 - -
Gma13g01634 701 ProSiteProfiles Leucine-rich repeat profile. 120 142 IPR001611 GO:0005515
Gma13g01634 701 PANTHER LEUCINE RICH REPEAT KINASE 2 397 701 - -
Gma13g01634 701 PANTHER LEUCINE RICH REPEAT KINASE 2 26 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01634 Gma-Chr13 31119051 31132944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01634 25 701 Strubbelig Receptor Gene Family AT4G03390 51.827 0.0 696
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Gma13g01634 PK_Tyr_Ser-Thr 1.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01634 - - gmx:100802955 1274.61