Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01626 ATGTCAGAGGAAATGGCAAGTGAGAGGTTTTACTCTGTATCCCAGAGGTTGCAGTCAGATGAAGCAAAGCAAGATATCTATTTGAAAGTTAACAAACCTCTTACCCTCAGGTTTGAAGATGTTGTGCATAAAATAAAAATTAGCAAAGGGAAAGGCTTGTTATGCTACAACAAAGAGGTAAGTTCTGAGGAGACACTGGTCTTGAAAGGGATCAGTGGTGTTATTTTTCCAGGTGAATTGTTAGTCATTTTAGGCCCTTCTGGTTGTGGCAAAACAACTCTGTTAGCTGCTTTGGGAGGCCGGCTAAATCACAGTATCACTAGAGGAAGCATAACCTACAATGGCAAACCCCTCTCAAAATCAGTGAAGCAAAACCTGGGATTTGTTTCTCAACAAGATGTCTTCTATCCTCACCTATCAGTCAGTGAGACACTCATCTTTTCGGCTCTTCTTCGCTTGCCAAATAGCGTATCTAAAGAAGAGAAAATCTTAAAAGCTCAGGCAATTATGAATGAACTTGACCTGACTCATTGTAAGGACACTATAATGGGAGGGCCACTCCTAAGGGGAGTTTCGGGTGGAGAATGGAAAAGGGTTAGCATAGGTCAACAACTTTTAACTAATCCAAGTCTCTTGCTTGTTGATGAGCCTACTTCAGGTCTTGACTCTACAACTGCTAGAAGAATTGTGCTAACTCTATGTGAGTTAGCTAAAGATGGAAGGACTGTCATAATGACTATTCACCAGCCTTCCAGCAAACTTTTTTACATGTTCCAGAAGATTTTACTGCTATCAGATGGTAGAAGCCTGTACTTTGGGAAGGGAGAAAATGTTATGAATTACTTCTCCAGTATCGGTTATACTCCATCCGTAGCTATGAATCCAACTGATTTCTTACTTGATCTTGCAAATGGTATTTATTCTGAAAATTTGGAAGAGGATACAAATGCTACAAAACAGGTGTTACTATCTGCTTTTGAGAGTAACCTTGCAAGCCAAGTGAAGATGGAACTTCAAATTTCCAGGGATTCAATCCATCACAATTCAGAAGATGAGATATTCGGTCAACATTGCACAACTTGGTGGCAGCAGTTTACTATATTACTAAGAAGGGGTTTCAAAGAAAGAAAGTATGAGCAATTTTCACCCCACAAAATCTGTCATGTTTTCGTCTTGTCATTCTTTGCAGGCTCTCTCTGGTGGCAGTCTGGAGCTGATCAAATGCATGACCAGGTAGCACTACTTTTCTACTATACACAATTTTGTGGATTCTTCCCTATGGTCCAGTCTATTTTTACATTTCCTCGTGATCGCGAAATGATAATAAAGGAAAGGTCCTTCTACATGTATAGACTCTCATCTTACATCATAGCAAGTAATCTTGATGACCTTCCATTGCAGCTAGCCTTGCCAACCCTTCTTGTCACTGTTACTTATTGGATGGGAGGGCTAAAAGCCAAAGCTTCAATTTTCTTTCGTACTCTAGCTGTTGCTCTTCTCTATTCTTTGGTATCACAAGGTTTTGGCCTTGCTATTGGAGCATTGCTGATAAATAATCAAAAAGTAGCTATTACAGTTGGAACTGTGGTCATGACATTGTTTCTTCTAGTTAATGGCTTCTTTGTTCGAAATACGCCAGCATTTGTGTCCTGGATAAAGTACCTATCTCATGGCTATTATTCCTATAAGCTCTTGCTAGGATCACAGTTTAACGGTTATGACACTTACCATTGTGGTCAAAATGTCACCTGCTCAGCTGTGAACTATCCTACAATTAAGCATGTGGGCATTGACAAGCAAGGTTTATCTGTTGCTGCTTTGGTGGCAATGCTTGTAGGCTACAGACTTATTGCCTATTTTGCCCTTAGGATTGGCACTAAACTTAACTAG 1890 0.4005 MSEEMASERFYSVSQRLQSDEAKQDIYLKVNKPLTLRFEDVVHKIKISKGKGLLCYNKEVSSEETLVLKGISGVIFPGELLVILGPSGCGKTTLLAALGGRLNHSITRGSITYNGKPLSKSVKQNLGFVSQQDVFYPHLSVSETLIFSALLRLPNSVSKEEKILKAQAIMNELDLTHCKDTIMGGPLLRGVSGGEWKRVSIGQQLLTNPSLLLVDEPTSGLDSTTARRIVLTLCELAKDGRTVIMTIHQPSSKLFYMFQKILLLSDGRSLYFGKGENVMNYFSSIGYTPSVAMNPTDFLLDLANGIYSENLEEDTNATKQVLLSAFESNLASQVKMELQISRDSIHHNSEDEIFGQHCTTWWQQFTILLRRGFKERKYEQFSPHKICHVFVLSFFAGSLWWQSGADQMHDQVALLFYYTQFCGFFPMVQSIFTFPRDREMIIKERSFYMYRLSSYIIASNLDDLPLQLALPTLLVTVTYWMGGLKAKASIFFRTLAVALLYSLVSQGFGLAIGALLINNQKVAITVGTVVMTLFLLVNGFFVRNTPAFVSWIKYLSHGYYSYKLLLGSQFNGYDTYHCGQNVTCSAVNYPTIKHVGIDKQGLSVAALVAMLVGYRLIAYFALRIGTKLN 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01626 629 Pfam ABC-2 type transporter 363 570 IPR013525 GO:0016020|GO:0140359
Gma13g01626 629 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 60 286 IPR027417 -
Gma13g01626 629 SMART AAA_5 77 268 IPR003593 -
Gma13g01626 629 PANTHER ABC TRANSPORTER G FAMILY MEMBER 21 17 624 - -
Gma13g01626 629 Gene3D - 55 285 IPR027417 -
Gma13g01626 629 Pfam ABC transporter 68 219 IPR003439 GO:0005524
Gma13g01626 629 ProSitePatterns ABC transporters family signature. 191 205 IPR017871 GO:0005524
Gma13g01626 629 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 36 291 IPR003439 GO:0005524
Gma13g01626 629 Pfam ABC-2 type transporter 248 317 IPR043926 GO:0140359
Gma13g01626 629 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 17 624 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01626 Gma-Chr13 31003724 31006764 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01626 78 277 Calmodulin-binding Proteins AT2G36910 28.910 5.22e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01626 K05681 - gmx:100800295 1229.93