Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01620 ATGGGCGTCGTTTCGAGGCTAGAGAGTGAAAGTAGTAGTGTACCCACAAACCCCTTCTTCTATTCCATTTTGTTTGGAACACTGCGTAAGGCTGCGCCACCACCTCCGCCTCCGTCGTCCACGGCCAGTTGCTTGCGTTCCTTTCACTTTTTTTATAATTGGCTAAGAATAATAATGGCGTACCGGCGCTGCCTCTTGATAAGAGGGAGCCTCGTGGATCGGAGGTGCCATCTGTCTTTCAGTTATGTTCTCCACAGCAACGAGGGGAAGCGCGAACGCACCAATGAAAAATCATCTTCAGGAGGGGTTGGTGATTTTACTCAAACAAGGTCCTTTGGAAGCTCTCTTAATGGACAGATGGGGTTCTTCTCGCCTTCCCGAGATAGATTTCTTTCTCCATGCACCGGATATGGTTTCTGCCAATATATGTCGACGGTGAATCGGGGTTCAGATAAGATTGGCAGTGATGTAATGACTGATGTGGCTGATGTCCTCGCTGACACGACCATGGATTCTGTAGCTTCTCAGGCTCCTGTTGTTAATGAGGTTGCTATTGCTGCTGCTGATTCTTTTTTGCCTGTACAGGCCTTGCAGTACGTGATAGATGCTGTGCATTTCTACactggcttaaattgGTGGGCAGCCATAGTTCTAACAACCCTGTTGATTCGAACCGCTACAGTTCCACTCTTAATAAATCAACTTAAGGCCACTTCTAAACTTACGTTAATGAGGCCTCACTTAGAAGAGATAAAGCAAGAAATGGAGGGACTGACTATGGATCCTGTAGCTGTTGCTAAAGGTCAGCAGCAGATGAAGAAGCTATTTAAGGAATATGGTGTGAGTCCTTTTACGCCATTGAAAGGACTCTTTATTCAAGGCCCTATTTTTGTTAGTTTTTTTCTTGCGATAACAAATATGGCTGAAAAAGTGCCGTCATTCAAGCATGGTGGAGCTTCTTGGTTTATTGATCTCTCAACTCCTGATGCCCTGTACGTTTTTCCAGTTTTGACAGCATTGTCATTCTTAATAACAGTAGAGTGTAATATGCAAGAAGGGATGGAAGGAAATCCTGTGGCTGGTACCATGAAAAATGTCTCTAGGGGTCTTGCTGTTCTTACAGTTCCTTTCACCATGGGATTTCCAAAGGCAATATTCTGTTACTGGGTTACATCAAATTTGTTTTCACTTGTGTATGGACTTGTGCTTAAAGTTCCTGGCGTAAAGAAAACTTTGGGTATTCCTGAAATACCTGTTGCTCCACCCACCACGACCAGTGCTACTCAATCTCCCTTTTCTATATTTCCTGCTCTAAAACAAGCTACATCTGCAACAAGAAATGGGTCAAGCTCAATACCAGATGAAGCTTCAAAACATTCAAATAAAAAGATATCTTCTGCTTCTGTTATTAGTCAAAGGCTTAGAAGTTTAGAGAAACAAGTGAAAGGAAGAAAGAAGAACAAGAAGTGA 1470 0.4293 MGVVSRLESESSSVPTNPFFYSILFGTLRKAAPPPPPPSSTASCLRSFHFFYNWLRIIMAYRRCLLIRGSLVDRRCHLSFSYVLHSNEGKRERTNEKSSSGGVGDFTQTRSFGSSLNGQMGFFSPSRDRFLSPCTGYGFCQYMSTVNRGSDKIGSDVMTDVADVLADTTMDSVASQAPVVNEVAIAAADSFLPVQALQYVIDAVHFYTGLNWWAAIVLTTLLIRTATVPLLINQLKATSKLTLMRPHLEEIKQEMEGLTMDPVAVAKGQQQMKKLFKEYGVSPFTPLKGLFIQGPIFVSFFLAITNMAEKVPSFKHGGASWFIDLSTPDALYVFPVLTALSFLITVECNMQEGMEGNPVAGTMKNVSRGLAVLTVPFTMGFPKAIFCYWVTSNLFSLVYGLVLKVPGVKKTLGIPEIPVAPPTTTSATQSPFSIFPALKQATSATRNGSSSIPDEASKHSNKKISSASVISQRLRSLEKQVKGRKKNKK 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01620 489 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 211 401 IPR028055 -
Gma13g01620 489 PANTHER MITOCHONDRIAL INNER MEMBRANE PROTEIN OXA1L 130 463 - -
Gma13g01620 489 MobiDBLite consensus disorder prediction 91 111 - -
Gma13g01620 489 PANTHER OXA1 130 463 IPR001708 GO:0016021|GO:0032977
Gma13g01620 489 Pfam 60Kd inner membrane protein 212 401 IPR001708 GO:0016021|GO:0032977
Gma13g01620 489 MobiDBLite consensus disorder prediction 444 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01620 Gma-Chr13 30934039 30941795 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01620 215 488 Chloroplast and Mitochondria Gene Families AT2G28800 24.739 1.58e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01620 K03217 - gmx:100792907 944.495