Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01584 ATGGATGAAGATAGCAGTAATTCTTGGATAAGGAGGGCCAAATTCTCCCACACAGTATGTCACAGGTTGAACTATTCCAGTTCTGGATTTGGCTCTTTCAGCATTCAGCCAAGGGCACAACACAGTTCTAGTAGTCTGAAATCAAGGCCTGAAGTGGCTTTTGCTTCCAACAAGGCTCAGAAGAAACCAATAATGAACAAGCAGAGATCTTTGTCCCCTTTGCCTCGAACCTCTCTCTCTGAGACCTTCAAGGAAGCCAGACATGAGCAGAAGAGGTTCTCAACACCTGGTCCAAGGAGGAAAGAACAGAACAAGGACAAGAGAATCATGGGGAAGTTGCTCAACAAGGATTCTCATGTGTCCAATTCCAAATCCCCTCGCAGTAGTCCAATTACTACTAAATCCCCTTACAGCAGTCCAATTAGGCACCTTGCTTCGATGAAATTAAGCTCGAAGCAGCACCGAAAGGATTTGGGATGGACAAAGTACTTTGATCATGGAGGGGGAAAGGTTACTGCTGTGGAAACAGCTGAGGAATGGAATGTTGACCTCTCCAAGCTCTTTGTTGGTGTTAGGTTTGCTCATGGTGCTCATAGCAGGCTTTACCATGGCATGTATAAAGATGAAGCTGTAGCTGTGAAAATTATCACGGTACCGGATGATGACGAAAATGGAATGTTGGTGGATCGATTAGAGAAACAATTCATTAGAGAAGTATCGCTTTTATCGTGCCTCCACCATCAAAATGTTATAAAGTTCGTAGCAGCATGTAGAAAGCCACATGTTTATTGTGTTATCACAGAATATCTATCAGAAGGTTCGTTGAGGTCATATTTGCATAAGTTGGAAAGAAAAACTATTTCTCTAGGGAAGCTAATTGCTTTTGCTCTGGACATTGCTCGTGGAATGGAATATATACACTCTCAAGGTGTCATTCACCGAGACCTTAAACCGGAGAATGTCCTTATCAATGAAGACTTTCACCTTAAAATTGCTGATTTTGGCATTGCTTGTGAGGAAGCATACTGTGACTTATTTGCTGATGACCCTGGTACCTACCGCTGGATGGCACCTGAGATGATCAAACGAAAATCCTATGGGAGAAAGGTTGATGTATATAGTTTTGGGCTTATCTTATGGGAAATGGTGACTGGAACTATACCATATGAGGATATGACTCCCATCCAGGCTGCTTTTGCCGTAGTAAATAAGAATGCAAGGCCAGTTATTCCTTCAGACTGTCCACCTGCAATGCGAGCTTTAATCGAGCAATGTTGGTCTTTGCATCCGGACAAGAGGCCCGAGTTCTGGCAGGTTGTTAAGGTATTAGAACAATTTGAATCTTCGCTTGCTCATGATGGAACTCTGACTCTGGTGGAAAATCCTTGTTGCCAAGATCACAAGAAAGGGCTTCTCCATTGGATTCAAAAGCTTGGTCCTGTGCATCATAATAATGGTCCTGTGCCTAAACCAAAATTTACATGA 1485 0.4296 MDEDSSNSWIRRAKFSHTVCHRLNYSSSGFGSFSIQPRAQHSSSSLKSRPEVAFASNKAQKKPIMNKQRSLSPLPRTSLSETFKEARHEQKRFSTPGPRRKEQNKDKRIMGKLLNKDSHVSNSKSPRSSPITTKSPYSSPIRHLASMKLSSKQHRKDLGWTKYFDHGGGKVTAVETAEEWNVDLSKLFVGVRFAHGAHSRLYHGMYKDEAVAVKIITVPDDDENGMLVDRLEKQFIREVSLLSCLHHQNVIKFVAACRKPHVYCVITEYLSEGSLRSYLHKLERKTISLGKLIAFALDIARGMEYIHSQGVIHRDLKPENVLINEDFHLKIADFGIACEEAYCDLFADDPGTYRWMAPEMIKRKSYGRKVDVYSFGLILWEMVTGTIPYEDMTPIQAAFAVVNKNARPVIPSDCPPAMRALIEQCWSLHPDKRPEFWQVVKVLEQFESSLAHDGTLTLVENPCCQDHKKGLLHWIQKLGPVHHNNGPVPKPKFT 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01584 494 ProSitePatterns Serine/Threonine protein kinases active-site signature. 311 323 IPR008271 GO:0004672|GO:0006468
Gma13g01584 494 SUPERFAMILY Protein kinase-like (PK-like) 174 443 IPR011009 -
Gma13g01584 494 MobiDBLite consensus disorder prediction 116 140 - -
Gma13g01584 494 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 4 471 - -
Gma13g01584 494 Pfam Protein tyrosine and serine/threonine kinase 193 443 IPR001245 GO:0004672|GO:0006468
Gma13g01584 494 Gene3D Phosphorylase Kinase; domain 1 175 271 - -
Gma13g01584 494 CDD STKc_MAP3K-like 194 443 - -
Gma13g01584 494 MobiDBLite consensus disorder prediction 61 79 - -
Gma13g01584 494 MobiDBLite consensus disorder prediction 41 140 - -
Gma13g01584 494 PRINTS Tyrosine kinase catalytic domain signature 267 280 IPR001245 GO:0004672|GO:0006468
Gma13g01584 494 PRINTS Tyrosine kinase catalytic domain signature 305 323 IPR001245 GO:0004672|GO:0006468
Gma13g01584 494 PRINTS Tyrosine kinase catalytic domain signature 351 361 IPR001245 GO:0004672|GO:0006468
Gma13g01584 494 PRINTS Tyrosine kinase catalytic domain signature 370 392 IPR001245 GO:0004672|GO:0006468
Gma13g01584 494 PRINTS Tyrosine kinase catalytic domain signature 414 436 IPR001245 GO:0004672|GO:0006468
Gma13g01584 494 ProSiteProfiles Protein kinase domain profile. 187 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g01584 494 PANTHER TYROSINE KINASE FAMILY PROTEIN 4 471 - -
Gma13g01584 494 SMART serkin_6 187 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g01584 494 Gene3D Transferase(Phosphotransferase) domain 1 272 469 - -
Gma13g01584 494 MobiDBLite consensus disorder prediction 81 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01584 Gma-Chr13 30594019 30597676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01584 1 494 MAP Kinase Kinase Kinase AT5G58950 56.772 0.0 592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Gma13g01584 PK_Tyr_Ser-Thr 1.6e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01584 - - gmx:100778344 1009.21