Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01583 ATGGAGAACAACCCTAGTTCATCATCAAGAACTGATAGAAAATTCATTGAACAGAATAGAAGAAATCATTTGAAGGATCTTTTCTTCAAGCTCAACTCAGTTGTGCCTCATCAAAGCTCAAGGGAGGCCATTTCGCGGCCGGATCAGATAGGTGAAGCCACAAATTACATAAAGAATTTACAGATTAAATTAGAGAAAATGAAGGAGAAAAAGAACAACCTAATAGACATTAAAAGATCAAAAAATGTTAGCATGAATATGGGATTGTTGAAGTCTCCACAATTTAAAATCCAACAAATGGGTTCAACTTTAGAGGTTTTTCTAATAACTGGGTTGGATTGTCAATTCATGTTCAATGAGACCGTTCGTGTTCTTCAAGAAGAAGGATCAGATGTTGTTAATGCCAGTTATACCGTTGTTGAAAATGAAGTTTTTCATACAATACACTGTCATCAGGTAGGGGAATCTGCAAATGGAGCTTTGAGGATATCTGAGAAATTAAAGAAGTATTTCAATGGCTGA 522 0.3544 MENNPSSSSRTDRKFIEQNRRNHLKDLFFKLNSVVPHQSSREAISRPDQIGEATNYIKNLQIKLEKMKEKKNNLIDIKRSKNVSMNMGLLKSPQFKIQQMGSTLEVFLITGLDCQFMFNETVRVLQEEGSDVVNASYTVVENEVFHTIHCHQVGESANGALRISEKLKKYFNG 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01583 173 Gene3D - 2 87 IPR036638 GO:0046983
Gma13g01583 173 Coils Coil 50 77 - -
Gma13g01583 173 Pfam Helix-loop-helix DNA-binding domain 10 61 IPR011598 GO:0046983
Gma13g01583 173 PANTHER TRANSCRIPTION FACTOR BHLH162 4 172 - -
Gma13g01583 173 SMART finulus 14 66 IPR011598 GO:0046983
Gma13g01583 173 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 8 60 IPR011598 GO:0046983
Gma13g01583 173 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 4 172 IPR015660 GO:0003700|GO:0006357
Gma13g01583 173 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 6 74 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01583 Gma-Chr13 30580998 30581690 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01583 3 173 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 39.674 4.07e-41 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gma13g01583 HLH 1.9e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01583 - - gmx:100789728 334.339