Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01575 ATGGGGGTGCACAGGAAGCAAATTTTCCAAAGGCACGCAGCGAGTTTAGGCGCGGCGGGATCATCACGAGATTGCAAAATGAAGTTCAACATTGCAAATCCCACCACTGGGTGCCAGAAGAAGCTGGAAATCGATGACGACCTGAAGCTTCGGGCATTTTGGGACAAGAGGATCTCCCAGGAGGTCCTTGGTGACGCCCTGGGTGAGGAGTTTAAAGGATATGTTTTCAAAATCACTGGTGGGTGTGACAAACAAGGATTCCCAATGAAGCAGGGAGTGTTGACCCCTGGTCGTGTTCGACTCTTGCTCCATAGAGCAGGAACTCCTTGTTTCCGTGGATATGGAAGGCGCAATGGAGAGCGTAGAAGGAAATCTGTTCGTGGGTGCATTGTCAGCCCAGACCTCTCTGTTTTGAACTTGGTAATTGTGAAAAAGGGTGAGAGTGACTTGCCCGGTCTCACTGATGTTGAGAAGCCAAGGATGAGGGGTCCAAAGAGAGCATCCAAAATCCGTAAGCTGTTCAACCTGTCCAAGGAGGACGATGTGAGAAAGTATGTTAACACATACCGTCGAACCTTTATAACAAAAGCTGGGAAAAAAGTGAGCAAAGCTCCAAAGATTCAACGATTGGTCACTCCTTTGACACTCCAAAGGAAACGAGCAAGGATTGCCGACAAGAAGAAGAGAATTGCTAAGGCAAAATCAGAAGCAGCAGAGTATCAAAAACTCCTTGCTTCCAGATTGAAGGAGCAGAGAGATCGCCGGAGTGAGAGCTTGGCTAAACGGAGATCCAAACTTTCCAGTGCTGCAAAACCAACTGCCTCAGCATAG 831 0.4826 MGVHRKQIFQRHAASLGAAGSSRDCKMKFNIANPTTGCQKKLEIDDDLKLRAFWDKRISQEVLGDALGEEFKGYVFKITGGCDKQGFPMKQGVLTPGRVRLLLHRAGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGESDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFITKAGKKVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKSEAAEYQKLLASRLKEQRDRRSESLAKRRSKLSSAAKPTASA 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01575 276 Gene3D - 160 268 - -
Gma13g01575 276 MobiDBLite consensus disorder prediction 245 276 - -
Gma13g01575 276 ProSitePatterns Ribosomal protein S6e signature. 78 89 IPR018282 GO:0003735|GO:0005840|GO:0006412
Gma13g01575 276 PIRSF RPS6e 27 276 IPR014401 GO:0003735|GO:0005840|GO:0006412
Gma13g01575 276 SMART Ribosomal_S6e_2 27 155 IPR001377 GO:0003735|GO:0005840|GO:0006412
Gma13g01575 276 Pfam Ribosomal protein S6e 27 155 IPR001377 GO:0003735|GO:0005840|GO:0006412
Gma13g01575 276 PANTHER 40S RIBOSOMAL PROTEIN S6 27 275 IPR001377 GO:0003735|GO:0005840|GO:0006412
Gma13g01575 276 Coils Coil 216 243 - -
Gma13g01575 276 MobiDBLite consensus disorder prediction 245 264 - -
Gma13g01575 276 PANTHER 40S RIBOSOMAL PROTEIN S6 27 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01575 Gma-Chr13 30508853 30511265 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01575 27 275 Cytoplasmic Ribosomal Protein Gene Family AT5G10360 72.400 1.27e-117 333