Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01573 ATGGAACAAGAGGGAGAAAAAGGGAGAGAGGAGAAAAGACAAATTCAACAACAGCAACCTCCTCCTCAGCAGCATCAGAAATGTCCACGCTGCGATTCCATGAACACCAAGTTCTGCTACTTCAACAACTATAGCCTCTCGCAGCCTCGTCATTTCTGCAAAGCGTGTAAAAGGTACTGGACACTCGGTGGAACCTTCAGGAACATACCCGTTGGTGGCGGTTCCCGCAAAGTGAAGCGTGGCAAAACAAATTCTCCAtcttcttcttcttcttcttcttcttcttGTTCAAATTTGCTCTCACAGCCACAGCAGAATCTGTTGATGAGGCCTTCTCCACCACCACTCACTACTAATACTATGGTTCAGTCAACTAGTCCTTATTATTATAATCTTGGTGTTGGTGGAAATGGGTATCTCTCTTTTCATTCTTCTCTGAACAACAACACACCATCACAGCCTTCCGATCAGTATCTGAAAGTTGGTGGTGGTGATCATGTTGCTGGTTCTTCTAATATTTCTCCTCTTGTGTCTGGCTTCAATAACGCTGCTAGTTATTCGCTTCCACCGCGATTCCACCACCAGCAGCAGCAACAATCTATGCATCCTGCACAACAACAACAACAACGTTTGATTAACATTCCATCAAACATGGCTAGTAGTAGCAGTGATGTTTCTCATTCTGGTGTTCGCCCGCAAAGCTTGATCAACaatgtttcaacaagtacagaccataatgtttcaacaagtacaaaccataGGGCTATTACTACTTCTGATGCTTCTTTGTGGAGTGCTGCTACTATCAACGCCACTTCCATCGGTGGAAACTCTGATCAGAACAATGTCGTCAAAGGGAGTTCTTCTTCTTCTTCTTCTTTGGTCCCAAATCTTTGGGTTCATCGCCCTGGGTTTGGTCCTCCTCAATAA 930 0.4161 MEQEGEKGREEKRQIQQQQPPPQQHQKCPRCDSMNTKFCYFNNYSLSQPRHFCKACKRYWTLGGTFRNIPVGGGSRKVKRGKTNSPSSSSSSSSSCSNLLSQPQQNLLMRPSPPPLTTNTMVQSTSPYYYNLGVGGNGYLSFHSSLNNNTPSQPSDQYLKVGGGDHVAGSSNISPLVSGFNNAASYSLPPRFHHQQQQQSMHPAQQQQQRLINIPSNMASSSSDVSHSGVRPQSLINNVSTSTDHNVSTSTNHRAITTSDASLWSAATINATSIGGNSDQNNVVKGSSSSSSSLVPNLWVHRPGFGPPQ 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01573 309 ProSiteProfiles Zinc finger Dof-type profile. 26 80 IPR003851 GO:0003677|GO:0006355
Gma13g01573 309 PANTHER DOF ZINC FINGER PROTEIN DOF5.4-LIKE ISOFORM X1 11 309 - -
Gma13g01573 309 MobiDBLite consensus disorder prediction 272 297 - -
Gma13g01573 309 MobiDBLite consensus disorder prediction 187 209 - -
Gma13g01573 309 MobiDBLite consensus disorder prediction 15 29 - -
Gma13g01573 309 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 11 309 IPR045174 GO:0003700|GO:0006355
Gma13g01573 309 MobiDBLite consensus disorder prediction 80 120 - -
Gma13g01573 309 MobiDBLite consensus disorder prediction 272 309 - -
Gma13g01573 309 MobiDBLite consensus disorder prediction 70 120 - -
Gma13g01573 309 Pfam Dof domain, zinc finger 24 80 IPR003851 GO:0003677|GO:0006355
Gma13g01573 309 MobiDBLite consensus disorder prediction 1 29 - -
Gma13g01573 309 ProSitePatterns Zinc finger Dof-type signature. 28 64 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01573 Gma-Chr13 30502896 30503830 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01573 16 88 C2C2-Dof Transcription Factor Family AT1G51700 68.000 1.91e-31 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Gma13g01573 zf-Dof 8.5e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01573 - - gsj:114375744 532.717